Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2227 ATGTTTGTCATACAAGAAGACTATAATAATGTTGTTGGAATAACTCTGAGCAAGAACTGGATGAAAAGAAATCAGCAAAGCCAAGTTATGCAAGGAGTTGATTGTTACTGTGACAAAGGTTTGAAATGTTATGCTTTTTTCACTGGTGGATTTGTCAAACAGAAGAGTCAGGCAGTGCCCTGTATAGCTGCTGCTGCGGTTTCATTGAGGATTTTTGCATCCAGTTGCACACTTAGTATGGATATAAAATGTGCCTGGCTAAAACATAGTACTCAGCGAAGGGAGTTAAGACTCCCCTCGTTGCCCTCTCACACTCTCACCACCATTCATCACCCCACAACAAAGACAAAGGTAAGCAGAACGACAAGGAAACGCAATCGCAGTTCCTCCTTCAGAAGAAGCAATTGGGTTGTCCCCAATGCATTGACAATGCATTGTACTTCTCGTAGTGGCAGCGATGATAACAACAACCACAACGGTGCCACTTTCCGCAACTCCAAGCTGAACGAGTCAACCTTCCTGGCTTCTCTCATGCCCAAGACGGAGATTGGGGCTGATCGTTTCCTTCATGCTCACCCACATTACGACGGGCGCGGCGCTCTCATTGCTATCTTCGATTCTGGTGTAGACCCGGCTGCAGCTGGATTACAGGTGACCTCAGATGGGAAACCAAAAATTGTCGATATTCTTGATTGCACTGGGAGCGGAGACGTTGATACCTCAAAGGTGGTAAAGGCTGATGCGGATGGTTGTATTTTGGGGGCTTCTGGGGCATCTTTGGTCATCAATACTGCCTGGAAAAATCCCTCTGGTGACTGGCATGTGGGTTATAAATTGGTTTATGAGCTTTTTACTGAAAATTTGACTTCTCGTTTGAAGAAAGAAAGAAAGAAAAAATGGGATGAGAGAAACCAGGAGGAAATTGCAAAGGCTGTAAAGCAGCTTACCGATTTTGATCAGGAACACGTGAAGGTGGAGGAAGCTAATCTTAAAAGGGTTCGTGAAGACATTCAGAATAAACTTGATCTTCTGAGGAAGCAGTCTGAGAGTTATGATGATAAAGGGCCTGCCATAGATGCTGTTGTCTGGTATGATGGAGAGGTTTGGAGAGTTGCAATTGACACAAAGAGCCTTGAGGACGATCCAGACTGTGGGAAACTTGCTAATTTTGTACCCTTAACTAATTATAGGACTGAGAAGAAGTATGGTATCTTCAGCAAATTAGATGCTTGTACATATGTTGTGAATGTCTATAATGATGGAAATGTCTTAAGCATGGTAACAGATAGCTCCCCTCATGGCACCCATGTTGCTGGTATAGCTGCTGCATTCCACCCAGAGGAACCTTTATTGAATGGAGTTGCACCTGGAGCACAATTAATATCTTGTAAAATTGGGGACTCTCGCTTAGGTTCAATGGAAACTGGAACTGGTCTGACTAGGGCTCTGATAGCTGCTGTTGAGCATAAATGTGACCTTATCAATATGAGTTATGGTGAGCCTACTTCACTGCCAGACTATGGACGGTTCGTTGACCTTGTGAATGAAGCAGTAAACAAGCATCGATTGATATTTGTGAGCAGTGCTGGTAATAGTGGGCCAGCATTGAGCACTGTTGGAGCACCTGGTGGTACATCTTCAAATATTATAGGTGTTGGAGCTTATGTTTCTCCTGCAATGGCAGCTGGTGCTCATTCTGTTGTTGCACCTCCTTCCGATGGGCTTGAATACACATGGTCTAGCCGTGGACCAACAACTGATGGAGATCTTGGCGTCTCTGTAAGTGCTCCTGGTTGTGCAGTTGCTCCTGTTCCTACATGGACCCTTCAACGGCGTATGCTCATGAATGGGACATCAATGGCATCACCATCAGCCTGTGGTGGAATTGCATTGCTCATAAGTGCAATGAAGGCTGAGGGGGTTCCTGTGAGTCCATATAGTGTGAGGAAGGCCCTTGAAAATACATCTCTTCCCATAGGTGGTTCACCTGAGGATAAGTTGTCCACTGGGCAAGGGCTTATGCAAGTTGACAAGTGTTATGAATATATAAAGCAGTCTCAAAATATTCCAAATGTTCGGTATCAAATAATGGTCAAAAAATCTGGAAAAACAAATGCTTGGTCACGGGGCATCTACTTGAGGGAGGCCAATGATTGCCGACAACCTATGGAGTGGACGGTGCAAGTTGATCCAAAATTTCATGAAGATGCCAAGAAGCTTGAGGAATTGGCTATGTTTGAGGAGTTCATTGAATTGCACTCATCAGATCAGACGGTTGTGAAAGCCCCCGAGTATCTACTGCTCACTCATAATGGCCGTACCTTCAACATAATTGTGGATCCTACCAATTTAAATGATGGTCTGCATTACTATGAGCTTTATGGTATTGACTACAAAGCACCATGGCGTGGTCCTATTTTCAGAATTCCAATTACTGTAACCAAGCCCATGGCTGTAACTGACAGATATCCTCTAGTTCCATTTTCAAATATGTTATTCCTGCCAGGCCATGTCGAGAGGAAGTATATAGAAGTGCCAAATGGTGCATCTTGGATTGAAGCAACTATGAATGCATCAAGTTTTGATACAGTTCGAAGATTTTTTGTGCACACAGTTCAGATATGTCCATTGCAAAGACCTTTTGCACGGAGGAATGTGATAACTTTTTCCTCTCCTGCTGCCAAAAGCTTTACCTTTAGGGTAGTAGGTGGTCAGACATTGGAACTAGTCATAGCTCAGTTTTGGTCAAGTGGCATTGGCAGTCATGCGACCACCAAGGTGGATCTTGAGGTTATGTTTCATGGTATAAAAGTCAATCAAGAGGAAATTGTACTTGATGGGAGTGAAGCACCAATCAGAATTGATGCTGAAGCGCTATTGGCATCTGAGAAACTTGCACCAGTAGGAATTCTGAATAAGATAAGGGTGCCCTATCGACCAATAGATGCTACAATTAGCTCACTTTCAAGCGATCGTGACAAACTCTCCTCTGGAAAGCAGATACTAGCATTGAAGTTAACATACAAGATCAAATTGGAAGATGGAGCTGAAATAAAACCTCAAATACCGTTTCTAAATGATCGGATATATGATACTAAATTTGAGTCTCAATTTTACATCATTTCCGATTCAAACAAGAAAGTATATTCAATTGGAGATGCCTATCCGAGCTCTACAAAACTTCCCAAGGGAGAATACAATTTACAACTGTATTTAAGGCATGACAATGTGCAGATTTTGGAAAAGATGAAGCAGCTGGTGTTATTCATCCAGCGGAATTTAGAAGAGAAGGAGATCATTCGGTTATGCTTTTTCTCTGAACCTGATGGTCCAGTGATGGGAGATAGTTCCTTTAAGTCCTCAACATTAGTTCCAGGTATAAAAGAAGGATTTTATCTTGGTCCTCCACCAAAAGACAAACTTCCCAAGAACTGTCTACAAGGATCTGTGCTGGTGGGATCAATATCATATGGTAAACTATCAGTTGCTGGTCTACAGGATGGTAAAAGTCCAGAAAAGCATCCTGTGTCACATCGGGTTTCTTATATCATTCCCCCAAATAAGGTTGACGAAGACAAGGGAAAAAGTTCTTCCTTATCTTCCAAAAAGACAGTTTCTGAACGCTTAGAACAAGAGGTACGAGATGCAAAAATGAAAGTGTTTGGTGGTCTAAAACAAGGAAGCAATGAAGAGTGTCTTGAATGGAAGGAGTTGTCTGCCTCACTCAAAACTGAATATCCAAAGCACACACCGTTGCTTGCAAAGATTTTAGAAGGTTTAGTTTCCAGAAGTTATATCAAAGACAAAGTTCTTCNTCATGAAGAGATAATTGATGCAGCAAATGAGGTTATTGACAGTGTTGATAAAGAAGAGTTAGCAAAATTTTTTGCACTAAAGCATGATCCAGGAGATGAGGAAGTAGAGAAAACCAAGAAAGAGATGGACTTAGCCCGTGATCAGTTGGCAGAAGCACTTTACCAAAAGGGGCTTGCACTGGCAGAGATTGCGTCTTTGAAGGAGGGAGATAAGTCCTTGGCTTTGGTTGCCACAGAAGGTGCAAAACAAGATGTGGAGAAAACTGATGAGCAATCAAAGGATGATGAGGTTCATCCAGACTTGTTCAAAGAGAACTTCAATGAACTGAAGAAATTGGTTGATGTCAAGTGCAGAAAATATGGAATCCTGTTGGTCACAAACGAGAGGCGTAATCAAAGGCTTGGGACAGCATTAAAGGTACTGAATGACATCATTGAAGATGATGGCGAGCCTGCCCCGAAGAAATTCTATGAACTAAAGCTCTCTTTGCTTGAGGAAATTGGGTGGACTCATTTTCGTTCATATGAGAGGGAATGGATGCTTGTGCGTTTCCCCCCAAGCTTGCCCCTTTTCTAG 4392 0.4265 MFVIQEDYNNVVGITLSKNWMKRNQQSQVMQGVDCYCDKGLKCYAFFTGGFVKQKSQAVPCIAAAAVSLRIFASSCTLSMDIKCAWLKHSTQRRELRLPSLPSHTLTTIHHPTTKTKVSRTTRKRNRSSSFRRSNWVVPNALTMHCTSRSGSDDNNNHNGATFRNSKLNESTFLASLMPKTEIGADRFLHAHPHYDGRGALIAIFDSGVDPAAAGLQVTSDGKPKIVDILDCTGSGDVDTSKVVKADADGCILGASGASLVINTAWKNPSGDWHVGYKLVYELFTENLTSRLKKERKKKWDERNQEEIAKAVKQLTDFDQEHVKVEEANLKRVREDIQNKLDLLRKQSESYDDKGPAIDAVVWYDGEVWRVAIDTKSLEDDPDCGKLANFVPLTNYRTEKKYGIFSKLDACTYVVNVYNDGNVLSMVTDSSPHGTHVAGIAAAFHPEEPLLNGVAPGAQLISCKIGDSRLGSMETGTGLTRALIAAVEHKCDLINMSYGEPTSLPDYGRFVDLVNEAVNKHRLIFVSSAGNSGPALSTVGAPGGTSSNIIGVGAYVSPAMAAGAHSVVAPPSDGLEYTWSSRGPTTDGDLGVSVSAPGCAVAPVPTWTLQRRMLMNGTSMASPSACGGIALLISAMKAEGVPVSPYSVRKALENTSLPIGGSPEDKLSTGQGLMQVDKCYEYIKQSQNIPNVRYQIMVKKSGKTNAWSRGIYLREANDCRQPMEWTVQVDPKFHEDAKKLEELAMFEEFIELHSSDQTVVKAPEYLLLTHNGRTFNIIVDPTNLNDGLHYYELYGIDYKAPWRGPIFRIPITVTKPMAVTDRYPLVPFSNMLFLPGHVERKYIEVPNGASWIEATMNASSFDTVRRFFVHTVQICPLQRPFARRNVITFSSPAAKSFTFRVVGGQTLELVIAQFWSSGIGSHATTKVDLEVMFHGIKVNQEEIVLDGSEAPIRIDAEALLASEKLAPVGILNKIRVPYRPIDATISSLSSDRDKLSSGKQILALKLTYKIKLEDGAEIKPQIPFLNDRIYDTKFESQFYIISDSNKKVYSIGDAYPSSTKLPKGEYNLQLYLRHDNVQILEKMKQLVLFIQRNLEEKEIIRLCFFSEPDGPVMGDSSFKSSTLVPGIKEGFYLGPPPKDKLPKNCLQGSVLVGSISYGKLSVAGLQDGKSPEKHPVSHRVSYIIPPNKVDEDKGKSSSLSSKKTVSERLEQEVRDAKMKVFGGLKQGSNEECLEWKELSASLKTEYPKHTPLLAKILEGLVSRSYIKDKVLXHEEIIDAANEVIDSVDKEELAKFFALKHDPGDEEVEKTKKEMDLARDQLAEALYQKGLALAEIASLKEGDKSLALVATEGAKQDVEKTDEQSKDDEVHPDLFKENFNELKKLVDVKCRKYGILLVTNERRNQRLGTALKVLNDIIEDDGEPAPKKFYELKLSLLEEIGWTHFRSYEREWMLVRFPPSLPLF* 1464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2227 1463 ProSitePatterns Serine proteases, subtilase family, serine active site. 617 627 IPR023828 -
Vra8g2227 1463 ProSitePatterns Serine proteases, subtilase family, histidine active site. 433 443 IPR022398 -
Vra8g2227 1463 Gene3D - 1203 1463 - -
Vra8g2227 1463 CDD Peptidases_S8_Tripeptidyl_Aminopeptidase_II 177 659 IPR034051 GO:0006508|GO:0008240
Vra8g2227 1463 Pfam Tripeptidyl peptidase II 960 1145 IPR022229 -
Vra8g2227 1463 Gene3D Peptidase S8/S53 domain 358 691 IPR036852 GO:0004252|GO:0006508
Vra8g2227 1463 Gene3D - 692 825 - -
Vra8g2227 1463 Pfam Subtilase family 197 670 IPR000209 GO:0006508|GO:0008236
Vra8g2227 1463 PRINTS Subtilisin serine protease family (S8) signature 197 216 IPR015500 -
Vra8g2227 1463 PRINTS Subtilisin serine protease family (S8) signature 429 442 IPR015500 -
Vra8g2227 1463 PRINTS Subtilisin serine protease family (S8) signature 616 632 IPR015500 -
Vra8g2227 1463 PANTHER TRIPEPTIDYL PEPTIDASE II 153 1355 - -
Vra8g2227 1463 Coils Coil 327 354 - -
Vra8g2227 1463 ProSiteProfiles Serine proteases, subtilase domain profile. 182 680 - -
Vra8g2227 1463 PANTHER PEPTIDASE S8 153 1355 - -
Vra8g2227 1463 Coils Coil 1307 1327 - -
Vra8g2227 1463 Coils Coil 1199 1219 - -
Vra8g2227 1463 Gene3D - 241 312 - -
Vra8g2227 1463 SUPERFAMILY Subtilisin-like 183 696 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2227 Vra-Chr8 40554721 40581141 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2227 K01280 - gmx:100787184 2359.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2227 8 40554721 40581141 Vra8g2227 8 40554721 40581141 ECH
Vra1g1834 1 34973408 34996097 Vra8g2227 8 40554721 40581141 PCT