Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1834 ATGCCGTGCTCTTCATCCACTTCCACCATCACCGGCGATAACAGCAGTAAAAAGAATAGAGATGGTTCTTCCTCTCTGCGCGAGTTCAAGCTGAACGAATCCACTTTCCTAGCTTCGAACATGCCTAAGAAGGAGATTGGCGTCGATCGTTTCCTCGACGCTCATCCTGAGTACGACGGTCGCGGCGCTCTCATCGCCATCTTCGATTCTGGTGTGGACCCAGCTGCTGATGGATTACAGACAACCTCAGATGGGAAGCCAAAAGTTCTCGACGTCATTGATTGCACAGGAAGTGGTGATATTGATACCTCAAAGGTGGTGAAGGCTGATGCTGATGGTCATATTGGTGGGGCTTCAGGGGCATCATTGGTTATCAATACATCATGGAAGAATCCTTCTGGTGAATGGCATGTGGGCTATAAATTGGTTTATGAGTTATTCACGGAAACTTTGACTTCTCGTTTGAAGAAAGAAAGAAAGAAAAAATGGGATGAGAAAAACCAGGAGGAAATTGCTAAGGCTGTAAAACAACTTGCTGACTTTGATCAGAAACACATCAAGGTAGAGGATGTTCATCTTAAAAGGGCTCGGGAAGATATCCAGAATAGACTTGATATTCTGAGAAAGCAATCTGAGAGCTATGATGATAGAGGGCCTGTCATAGATGCTGTTGTCTGGCATGATGGAGAGGTTTGGAGGGTTGCCCTTGACACACAGAGTCTGGAGGATGATCTAAATAGTGGAAAGCTTGTTGATTTTGTGCCTTTAACTAATTATAGGATAGAGAGGAAGTATGGTGTCTTCAGCAAATTAGATGCTTGTACATTTGTTGTTAATGTCTATAATGATGGGAATGTCTTGAGTATCGTAACAGACTGTTCTCCACATGCCACCCATGTTGCTGGTATAGCTACTGCCTTCCACCCAAAGGAGCCCTTGTTGAATGGAGTTGCACCTGGTGCACAAATAATATCTTGTAAAATTGGGGATTCTCGCTTAGGTTCAATGGAAACAGGAACTGGTTTAACTCGGGCACTGATAGCTGCTGTGGAGCATAAGTGTGATCTTATCAACATGAGTTATGGTGAAGGAACATTACTACCAGACTATGGGCGCTTTGTTGACCTTGTGAATGAAGTGGTGAACAAGTATCGTTTGATATTTGTGAGCAGTGCTGGTAACAGTGGACCAGGATTGAGCACTGTTGGTGCACCTGGTGGTACTTCCTCAAGTATCATAGGTGTTGGTGCGTATGTATCTCCTGCTATGGCTGCTGGTGCTCATTGTGTTGTTGAGCCTCCTTCTGATGGGCTTGAATACACTTGGTCTAGCAGAGGACCAACAGCTGATGGAGACCTTGGTGTTTGTGTGAGTGCTCCGGGTGGTGCTGTTGCTCCTGTTCCCACTTGGACTCTGCAACGGCGTATGCTCATGAATGGGACATCAATGGCATCACCTTCAGCCTGTGGAGGAATTGCATTGGTCATAAGTGCAATGAAGGCTGAGGGAATTCCTGTGAGTCCATACAGTGTGAGGATAGCACTTGAAAATACTGCAGTCCCCATAGGTGATTTACCTGAGGATAAATTATCCAGTGGACAAGGGCTTATGCAAGTTGACAAGGCTTTTGAATATATACAGAAGTGTCAAGATGTTCCATGTGTTTGGTATCAAATAAAAATCCAGCAATCTGGAAAAACTAATCCTTCGTCAAGGGGCATCTACCTTAGGGAGGCTAGTGCTTGCATGCAATCTACTGAGTGGACAGTGCAAGTTAATCCAAAATTTCATGAAGATGCTGACAACTTAGACGATTTGGTTCCATTTGAGGAGTACATTGAATTGCATTCTACAGAAGAAACAGTTGTGAAGTCCCCTGACTATCTTTTGCTCACTCATAATGGTCGCACCTTCAATGTAGTGGTCGATCCTTCCAATCTTTCTGATGGTCTTCATTATTTTGAGGTCTATGGTATTGATTGCAAAGCTCCATGGCGAGGTCCTCTTTTCAGAATTCCAATCACCATAACAAAGCCTAAGGCTGTAACTAACATGCCTCAACAAATTTCTTTTTCAAAGATGTTATTCCAGCCAGGCCATATAGAAAGAAGATACATCGAAGTTCCGCATGGTGCAACTTGGGCTGAAGCAACAATGAAAACCTCAGATTTCGACACAGCAAGAAGATTTTATGTGGATGCTGTTCAGCTGTGCCCACTGCAAAGACCTTTGAAATGGGAGACTGCTGTAACTTTTCCTTCTCCTGCTGCGAAAAGCTTTGCGTTTAGGGTAGTAAGTGGTCAGACATTGGAATTAGTCATTTCTCAGTTTTGGTCAAGTGGCATAGGGAGTCCTGAGACTGCGAGTGTGGATTTTGAGGTTGTGTTTCACGGGATAAAAGTCAATCAGGATGTTATACTTGATGGTAGTGATGCACCAGTTAGGATTGACACTGAAACACTACTGGTATCTGAGGAACTTGCACCTGTGGCAATTCTGAACAAGGTTAGGGTACCATATCGACCAGTAGATTCTAAGATTAGTGCACTTTCAACAGATCGTGACAAACTTCCTTCTGGACAGCAGATACTGGCACTGACTTTGACCTACAAGATCAAATTGGAAGATGGAGCTCAAGTAAAACCTCATGTACCATTGTTAAATGACCGGATATATGACACTAAATTTGAGTCCCAATTTTACATGATTTCTGACTCAAACAAGCGCATATATTCAAGTGGAGATGTCTATCCAAGTTCTTCAAATCTTCCCAAAGGAGAATATACTCTACAGTTATATTTGAGGCATGACAATGTGCAGATTTTGGAAAAGATGAGGCATTTGGTGCTATTCATTGAGCGAAATTTGGAAGAGAAGGATGTAATACGGTTAAGCTTTTTCTCTCAACCTGATGGCCCACTGGTGGGAAATGGTTCATTTAAGTCCTCATCACTAGTTCCAGGTATAAAAGAAGGGCTATATATTGGTCCACCACAAAAAGAAAAGCTTCCCAAGAATTCTCCACCCGGATCTGTATTGCTAGGGACAATTTCATATGGGAAGCTATCATTTGCTGGTCAGGGAGAAAATACAAATCCTGAAAAGCACCCTGCTTCGTATACGATTTCTTATATAATTCCCCCAAATAAGATTGACGAGGACAAGGGAAAAGGTTCTTCCTTATCTTCCAAGAAGAACGTTTCAGAACGCATAAACGAAGAGGTAAGAGATACTAAAATAAAAGTTCTAGCAAGCTTGAAACAAGAAACTTCTGAAGAGCGCTCGGAGTGGAAAGAGCTATCTGCCTTGCTCAAATCAGAATATCCAAAGTACACTCCATTACTCGCAACCATTTTGGAAGGTCTAGTTTCTAGGAGTAATGTCAAAGACAAAATTAATCATGATGAAGAGGTGATTGGTGCTGCCAATGAGGTGATTGACAGTATTGACAGAGAAGAGCTGGCAAAATTTTTTGCACTAAAAAATGATCCTGAAGAGGAAGAAGCAGAGAATATCAGAAAAAAGATGGAGTTAACCCGAGACCAATTGGCAGAGGCACTGTACCAAAAGGGGCTTGCGCTGGCAGAGATTGAGTCTTTAAAGTTGGCAGACTTGACTTGGTGTATATTGTCAAAGGACGGAGATAAGTCCCCAACTTCGGCTGCAACAGAAGGGGCAAAAGGAGGCTTGGACAAAAAACAATCTACAGATGATCGCAAAGATTTGTTTGAAGAGAATTTTAAAGAACTGAAGAAATGGGTTGATGTGAAGTCAGCTAAATATGGAATCCTCTTAGTAACACGAGAGAGGCGAGCTCAAAGGCTTGGGACAGCATTGAAGGTACTGTGTGACATAATTCAAGATGATGCAGAGCCTGCCAAAAAGAAATTCTACGATCTGAAACTGTCTTTGCTTGATGAGATTGGATGGACACATTTAGCTACATACGAGAGACAGTGGATGCATGTGCGTTTCCCTCCAAGCTTGCCTCTTTTCTAG 3999 0.4276 MPCSSSTSTITGDNSSKKNRDGSSSLREFKLNESTFLASNMPKKEIGVDRFLDAHPEYDGRGALIAIFDSGVDPAADGLQTTSDGKPKVLDVIDCTGSGDIDTSKVVKADADGHIGGASGASLVINTSWKNPSGEWHVGYKLVYELFTETLTSRLKKERKKKWDEKNQEEIAKAVKQLADFDQKHIKVEDVHLKRAREDIQNRLDILRKQSESYDDRGPVIDAVVWHDGEVWRVALDTQSLEDDLNSGKLVDFVPLTNYRIERKYGVFSKLDACTFVVNVYNDGNVLSIVTDCSPHATHVAGIATAFHPKEPLLNGVAPGAQIISCKIGDSRLGSMETGTGLTRALIAAVEHKCDLINMSYGEGTLLPDYGRFVDLVNEVVNKYRLIFVSSAGNSGPGLSTVGAPGGTSSSIIGVGAYVSPAMAAGAHCVVEPPSDGLEYTWSSRGPTADGDLGVCVSAPGGAVAPVPTWTLQRRMLMNGTSMASPSACGGIALVISAMKAEGIPVSPYSVRIALENTAVPIGDLPEDKLSSGQGLMQVDKAFEYIQKCQDVPCVWYQIKIQQSGKTNPSSRGIYLREASACMQSTEWTVQVNPKFHEDADNLDDLVPFEEYIELHSTEETVVKSPDYLLLTHNGRTFNVVVDPSNLSDGLHYFEVYGIDCKAPWRGPLFRIPITITKPKAVTNMPQQISFSKMLFQPGHIERRYIEVPHGATWAEATMKTSDFDTARRFYVDAVQLCPLQRPLKWETAVTFPSPAAKSFAFRVVSGQTLELVISQFWSSGIGSPETASVDFEVVFHGIKVNQDVILDGSDAPVRIDTETLLVSEELAPVAILNKVRVPYRPVDSKISALSTDRDKLPSGQQILALTLTYKIKLEDGAQVKPHVPLLNDRIYDTKFESQFYMISDSNKRIYSSGDVYPSSSNLPKGEYTLQLYLRHDNVQILEKMRHLVLFIERNLEEKDVIRLSFFSQPDGPLVGNGSFKSSSLVPGIKEGLYIGPPQKEKLPKNSPPGSVLLGTISYGKLSFAGQGENTNPEKHPASYTISYIIPPNKIDEDKGKGSSLSSKKNVSERINEEVRDTKIKVLASLKQETSEERSEWKELSALLKSEYPKYTPLLATILEGLVSRSNVKDKINHDEEVIGAANEVIDSIDREELAKFFALKNDPEEEEAENIRKKMELTRDQLAEALYQKGLALAEIESLKLADLTWCILSKDGDKSPTSAATEGAKGGLDKKQSTDDRKDLFEENFKELKKWVDVKSAKYGILLVTRERRAQRLGTALKVLCDIIQDDAEPAKKKFYDLKLSLLDEIGWTHLATYERQWMHVRFPPSLPLF* 1333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1834 1332 SUPERFAMILY Subtilisin-like 43 550 IPR036852 GO:0004252|GO:0006508
Vra1g1834 1332 Gene3D - 104 175 - -
Vra1g1834 1332 PRINTS Subtilisin serine protease family (S8) signature 60 79 IPR015500 -
Vra1g1834 1332 PRINTS Subtilisin serine protease family (S8) signature 292 305 IPR015500 -
Vra1g1834 1332 PRINTS Subtilisin serine protease family (S8) signature 479 495 IPR015500 -
Vra1g1834 1332 MobiDBLite consensus disorder prediction 1 25 - -
Vra1g1834 1332 Coils Coil 1166 1186 - -
Vra1g1834 1332 Gene3D - 1065 1332 - -
Vra1g1834 1332 ProSitePatterns Serine proteases, subtilase family, serine active site. 480 490 IPR023828 -
Vra1g1834 1332 PANTHER TRIPEPTIDYL PEPTIDASE II 14 1217 - -
Vra1g1834 1332 Gene3D - 556 691 - -
Vra1g1834 1332 MobiDBLite consensus disorder prediction 1 19 - -
Vra1g1834 1332 Gene3D Peptidase S8/S53 domain 220 554 IPR036852 GO:0004252|GO:0006508
Vra1g1834 1332 MobiDBLite consensus disorder prediction 1215 1235 - -
Vra1g1834 1332 PANTHER PEPTIDASE S8 14 1217 - -
Vra1g1834 1332 Pfam Subtilase family 60 523 IPR000209 GO:0006508|GO:0008236
Vra1g1834 1332 Coils Coil 197 217 - -
Vra1g1834 1332 CDD Peptidases_S8_Tripeptidyl_Aminopeptidase_II 41 522 IPR034051 GO:0006508|GO:0008240
Vra1g1834 1332 Pfam Tripeptidyl peptidase II 822 1006 IPR022229 -
Vra1g1834 1332 ProSiteProfiles Serine proteases, subtilase domain profile. 45 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1834 Vra-Chr1 34973408 34996097 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1834 K01280 - gmx:100798235 2372.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g1834 1 34973408 34996097 Vra1g1834 1 34973408 34996097 ECH
Vra1g1834 1 34973408 34996097 Vra8g2227 8 40554721 40581141 PCT