Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2134 ATGGAAGCAGAGACATTGAATGCTAATCACACTCCCAGTTTGCTTCACCGGTCTCTTCCTGCTGTTGTGCCTATGCTTTTGATTTCAATCGGATATGTTGACCCTGGAAAGTGGGTGGCAATTGTTGAAGGAGGTGCACGATTCGGATTTGATTTGATGGCTTTCGCACTTATCTTCAACTTTGCTGCAATCTTCTGTCAATACATATCAGCAAAGATTGGTGTTGTCACAGGAAAAGATCTTGCTCAGATATGCAGTGATGAGTACGACAACTGGACATGCATGCTCCTTGGAGTTCAAGCAGAACTTTCGGTGATCATGCTAGACCTTAACTTGATATTGGGCATGGCACATGGATTAAATATTCTCTTTGGGTGGGACTTGTTCACTTGTGTCTTTTTAACTGCTACTGGCGCTGTTTTCCATCTCCTTCTTTTTGTCCTCCTTGACATTGAGAAGGCCAAGATCGTGGGCCTGTTTGTGTCATGTTTTGTCTTTCTTACATTTGTATTTGGAACACTCATTAATCAACCAGACATTCCATTATCCATTAATGGAATATTAACAAAGTTGAGTGGGGAGAGTGCATTTGTGCTGATGAGTCTTTTAGGAGCAACTCTTGTGCCTCACAACTTCTACCTTCATTCCTCTATTGTACAGTGGCATCAGGGATCAACTACTATTTCTAAGGATGCTTTATGTCATAACCATTTTTTGGCCATCATATGTGTCTTCAGTGGCCTTTATTTGGTAAATAATGTGCTGATGAATGCTGGAGCAAATGAGTTCTACAGTATGGGTCTTGTTTTAACTACATTTCAGGACGCATTATCTCCAATGGAACAGGTGTTACGTAGTCCAATAGCCATGCTTGCTTTTTTACTCATTCTGTTTTTCGCAAACCAAACAACAGCGTTAACTTGGGGTTTTGGTGGAGAAGTAGTTGTGCATAATTTCTTAAAATTGGACATTCCAGGTTGGCTTCATTATGCTACAATTAGAGTAGTTGCTGTTTTGCCCGCCCTTTATTGTGTTTGGAGTTCAGGAGCTGAAGGGATGTATCAACTACTTATATTCACTCAGATTGTGGTAGCTTTGCAACTTCCATCTTCTGTGATCCCCCTTTTTCGGATAGCGTCATCTAGATCAATAATGGGGGTACACAAGATCCCTCAATTTGTGGAATTTTCGGCCTTGATCATATTTATTGGGATGCTTGTCTTGAATATTGTCTTTGTTGTAGAAATGATATTTGGTAGTAGTGATTGGGTGGGCAATTTGAAATGGAACGTGGGGAATGGTGTCTCTCTCTCATACTTGGTTCTTCTTTGCACTGCTTTTGCATCATTCTGTTTGATGCTTTGGTTAGCTGCCACACCATTAAAATCTGCAAGTATTCAATTAGATGAAGCATGGAACTGGGACATGCCACAGGCTACACAAGAACCACGGATTGATAATAAGGAAACAGATTTAAATGAAACAAGATATCATGGAGATGCATCTGTTCAGGTGATGGAACCATCACCAGCTCTAGCAAGGACCCTGGAATACTCAGAATTACCTGTTGCAGGTTTTCATCATGAACTACCTGAAACTATTATGGAGCCTGATGTTCCAGTGACTACTGTAAGAGAGACTCATTCATTTACATCATTTCCTTGCTCCCCAACACCTGTTGTTAAGGAATCAACTTCCACTTCAGAATCAGAGGCAGTGCCAGCAGCAAGTACTGATACTTCTGGTATTAGTTTGGGAGATGCCAAAACTTTAAAAACAGAAATTAGTGCTCCTGTTGAGAAAACTGTAGAAGTTGAGGGAGATTCAAATGCCGAAAGGGATGATGATGATGGAGATTCATGGGAAACTGAAGAAATATCAAAAGTGGTCTCACTTGCCCCATCTTCAGCACCGGATGGCCCAGCATCATTCAGGAGTCTTAGTGGGAAAAGTGATGATGGAGGTAATAGCATTGGAAGTCTTTCAAGATTAGCAGGTTTAGGGCGTGGTGCAAGACGTCAACTAGCTGCTATTCTTGACGAATTCTGGGGGCAGCTTTATGATTTGCATGGTCAATTTACCCAGGAAGCTAAGGCTAAGAAACTTGATATTTTACTGGGAGTGGATTCAAGACTCACTGGTTCTTTGCAGAAAATGGATACATGTGGAAAGGAACATTCTGGGCACTGGATGTCTGCAGGAAGTAGACAGGAAAATCTGATCAGCTCCGCTCCATATGACTCTCCCAAGCAGCATAGGATGCAAAGTAATTTTGAGCCTTCCTATGAGCCTCGAAGGAGTTATCACTCAGTGAGAACAAATCCCGTGCAGTTTATGGATGAATATGTTCAGACTTCCAACCGCAATTTCCTCAGTGCTGGTGAAAGGCGTTATTTCAGTGTGCGCAATCTACCTACATCCGGGTCCTGGGATAATCCGCCACCTACTGTACATGGTTATCAGGTTGCATCATATATTAATCAGGTTGGTAAAGAGACGAATTCTGATAACTTAAATGATCTGATGGAATCCCCTTCCATGGGTATTATGAACAACTACAGGAATTCTATTACTAATACAAACAACTACAGGAATTCTATCGCTCTTGCTATGGGGCAAAAGTTGCAAAATGGTTCAGGTTTAAGCCAACCCCCAGGCTTCCACAATATTGCTGTCCCTAAAAATAGCCAATTGCCATCTGAGAGGTCCTGTTACGGACCAGCTGATAATTCAGTCAGCTCAGTTAATGCTAAGAAGTACCACAGTTTGCCAGACATTTCAGGATATGCCATCCCTCACAAGGATCCTTACGTATCTGATAAGAGAGCTATGTGGGATGGTTCTGTTGGTGGCCATAGATCTTCTGCGGGTAGGACTCATCATGAACAGTCATTATTTTCAAATTCCGGATCAAGGACAGGAGCTCCTTTAGCCTTCGATGTACTCTCTCCATCAAAAGTCTACACCAATGTACTTTCTTCCCAGTTGAGTTCTGGTTTGGGTACTGGATCCCTCTGGTCCAGACAGCCTTTCGAGCAGTTTGGGGTGGATGATAAAGTTCATAATGCTGCAACAGAAGATGTTGGAAATAGACCTAGTGCAATTACTCAAGAAACTACTTCGATTGTGGATGTAGATGGCAGATTTCTTCAATCTTTTAGAAGTTGTATTTTGAAACTCTTAAAACTGGAAGGTTCTGATTGGCTGTTTAAACAGAATGATGGGGCTGATGAAGATTTGATTGACCGGGTTGCTGCTAGGGAAAAATTTTTCTCTGAAGTTGAAACTACAGAGATGAATCAGGCAAATCCTATGGGAGAGGGTCGCTATTTTTCTTCTGATGGGAAGTCTTTATCTTCAATGAAGAACAATGAGGCAAATTGGTCTAATTTTTCTGTGACCTCAATCCCCAACTGTGGGGATGGATGTGTTTGGAGAGCAGACATAATTATAAGCTTTGGGGTGTGGTGTATCCATCGTGTTCTTGACCTCTCACTGATGGAGAGCCGACCAGAGCTGTGGGGCAAGTACACTTATGTACTTAATCGCTTGCAGGGTGTAATTGATCTGGCTTTCTCCAAGCCTCGTAGTCCCATGACAGCATGCTTTTGCCTTCAAGTACCCATGACGTACCAGATAAAATCAAGCTCACCTCCTTCCAACGGGATGCTGCCACCAGCTTCAAAACCAGGCCGCGGAAAATGCACCACTGCGTCTGTGGTGTTTGAGATGGTGAAGGATGTGGAGATAGCAATCTCTAGCCGAAAAGGTCGTACTGGAACTGCTGCTGGTGATGTAGCCTTCCCAAAGGGAAAGGAGAATTTAGCATCTGTTCTCAAACGGTACAAGCGTAGATTATCCAACAAACCAGTTGGCATTCAAGAAGGGATTCGCAAGATTCCCACATCAGCACCATACAACTCTTAG 3927 0.4255 MEAETLNANHTPSLLHRSLPAVVPMLLISIGYVDPGKWVAIVEGGARFGFDLMAFALIFNFAAIFCQYISAKIGVVTGKDLAQICSDEYDNWTCMLLGVQAELSVIMLDLNLILGMAHGLNILFGWDLFTCVFLTATGAVFHLLLFVLLDIEKAKIVGLFVSCFVFLTFVFGTLINQPDIPLSINGILTKLSGESAFVLMSLLGATLVPHNFYLHSSIVQWHQGSTTISKDALCHNHFLAIICVFSGLYLVNNVLMNAGANEFYSMGLVLTTFQDALSPMEQVLRSPIAMLAFLLILFFANQTTALTWGFGGEVVVHNFLKLDIPGWLHYATIRVVAVLPALYCVWSSGAEGMYQLLIFTQIVVALQLPSSVIPLFRIASSRSIMGVHKIPQFVEFSALIIFIGMLVLNIVFVVEMIFGSSDWVGNLKWNVGNGVSLSYLVLLCTAFASFCLMLWLAATPLKSASIQLDEAWNWDMPQATQEPRIDNKETDLNETRYHGDASVQVMEPSPALARTLEYSELPVAGFHHELPETIMEPDVPVTTVRETHSFTSFPCSPTPVVKESTSTSESEAVPAASTDTSGISLGDAKTLKTEISAPVEKTVEVEGDSNAERDDDDGDSWETEEISKVVSLAPSSAPDGPASFRSLSGKSDDGGNSIGSLSRLAGLGRGARRQLAAILDEFWGQLYDLHGQFTQEAKAKKLDILLGVDSRLTGSLQKMDTCGKEHSGHWMSAGSRQENLISSAPYDSPKQHRMQSNFEPSYEPRRSYHSVRTNPVQFMDEYVQTSNRNFLSAGERRYFSVRNLPTSGSWDNPPPTVHGYQVASYINQVGKETNSDNLNDLMESPSMGIMNNYRNSITNTNNYRNSIALAMGQKLQNGSGLSQPPGFHNIAVPKNSQLPSERSCYGPADNSVSSVNAKKYHSLPDISGYAIPHKDPYVSDKRAMWDGSVGGHRSSAGRTHHEQSLFSNSGSRTGAPLAFDVLSPSKVYTNVLSSQLSSGLGTGSLWSRQPFEQFGVDDKVHNAATEDVGNRPSAITQETTSIVDVDGRFLQSFRSCILKLLKLEGSDWLFKQNDGADEDLIDRVAAREKFFSEVETTEMNQANPMGEGRYFSSDGKSLSSMKNNEANWSNFSVTSIPNCGDGCVWRADIIISFGVWCIHRVLDLSLMESRPELWGKYTYVLNRLQGVIDLAFSKPRSPMTACFCLQVPMTYQIKSSSPPSNGMLPPASKPGRGKCTTASVVFEMVKDVEIAISSRKGRTGTAAGDVAFPKGKENLASVLKRYKRRLSNKPVGIQEGIRKIPTSAPYNS* 1309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2134 1308 PRINTS Natural resistance-associated macrophage protein signature 97 123 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vra8g2134 1308 PRINTS Natural resistance-associated macrophage protein signature 199 222 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vra8g2134 1308 PRINTS Natural resistance-associated macrophage protein signature 301 320 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vra8g2134 1308 PRINTS Natural resistance-associated macrophage protein signature 329 346 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vra8g2134 1308 PRINTS Natural resistance-associated macrophage protein signature 361 380 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vra8g2134 1308 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 14 1193 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vra8g2134 1308 MobiDBLite consensus disorder prediction 555 656 - -
Vra8g2134 1308 MobiDBLite consensus disorder prediction 555 587 - -
Vra8g2134 1308 PIRSF EIN2 1 1306 IPR017187 GO:0009873
Vra8g2134 1308 MobiDBLite consensus disorder prediction 744 767 - -
Vra8g2134 1308 MobiDBLite consensus disorder prediction 948 969 - -
Vra8g2134 1308 PANTHER ETHYLENE-INSENSITIVE PROTEIN 2 14 1193 - -
Vra8g2134 1308 Pfam Natural resistance-associated macrophage protein 38 390 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2134 Vra-Chr8 39578549 39586493 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2134 1 1299 Miscellaneous Gene Families AT5G03280 51.429 0.0 1226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2134 - K14513 gmx:100801190 2202.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2134 8 39578549 39586493 Vra8g2134 8 39578549 39586493 ECH
Vra3g0417 3 4813392 4824823 Vra8g2134 8 39578549 39586493 PCT