Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0417 ATGATATCAAGAAGTAAAATGGAGGCAGAGAGATTGAGTCCCAACCACCCTCCTAGCTTTCTACGTCAGTCACTTCCTGCTATTGTACCTATGCTTTTGATTTCTACAGGATATGTTGACCCTGGAAAGTGGGTAGCGACCGTTGAAGGTGGTGCACGGTTTGGGTTTGATCTGATGGCTTTCATGCTTATTTTCAATTTTGCTGCTATATTCTGTCAGTACATATCTGCAAGGATTGGCGTAGTTACAGGAAAAAATCTTGCACAGATTTGCAGTGACGAGTATGATACATGGACATGTATGCTCCTTGGAGTTCAAACAGAACTTTCAGTGATAATGCTAGACCTTAACATGATCTTGGGCATGGCACAAGGGTTAAATCTTATTTTTGGGTGGGACTTGTTCAGTTGTGTCTTTTTAGCTGCTACCGGTGTTGTTTTTCACATACTTCTTGCAGTCTTACTTGACATTGAGAAGGCAAAATTCCTAGGCCAGTTTGTTGCAGGCTTTGTTTTGGTTTCTTTTATACTTGGAATGCTTATCAACCAACCGGAAATTCCATTTTCTATGAATGGAATATTAATAAGATTGAGTGGGGAGAGTGCATTTGTGCTAATGAGTCTTCTAGGAGCAAATCTTGTACCTCACAACTTTTACCTGCATTCCTCTATTGTACAGTGGCATCAGGGACCGGCAAGCATTTCAAAGAATGCTTTGTGTCATAACCATTTTTTTGCCATATTATGTGTTTTCAGCGGTCTTTATCTGGTAAATAATATGTTGATGACCTCCTCGGCAAATGAGTTCTACAGCACAGGGCATGTTCTGCTAACTTTCCAGGATGCGTTGTCACCAATGGAACAGGTCTTACGTAACCCAATAGCTCTACTTGGGTTTTTACTCCTTTTGTTTCTTGCAAATCAAATCACCGCATTAAGTTGGAGTTTAGGTGGAGAAGTAGTAGTGCAAGGTTTCTTAAAATTGGATATTCCGGGTTGGCTTCACTATGCTACAATTAGAGTGATTACTGTTTTGCCTGCCCTTTATTTTGTCTGGACTTCAGGAGCCGAAGGGATGTATCAGCTACTATTATTCACTCAAGTTTTGGTAGCTCTACAACTTCCATCTCTAGTGATCCCCCTTTTTCGTGTAGCTACATCTAGATCAATAATGGGTGTACACAAGATTTCCCAGTTTCTGGAACTGTTGGCATTGATCATATTCATTGGGATGCTTGGCCTGAATATTGTATTTGTGGTAGAAATGATGTTTGGAAATAGTGATTGGGCGAGTGATTTGAGATGGAATGTGGGGAGTGGTGTATCTATCTCATATTTAGTTCTTCTAACAACTTCCGTTTCATCGTTATGTTTTATGCTTTGGTTAGCAGCCACACCTTTGAGATCTGTCAGTGTTCGATTAGATTCTAAGACGTGGAACTGGGATATGCCAAACACTCTGCCTAATCCACCGAATATTGGCGAGAAATCTTATTTAAGTGAAACAAGATGTCGAGAAGATGAACCTATGCATGTACAGGAACCCACACCAGCTGTAACAAAGACCTTGGAGTACTCTGATGTATCACATCCAAGTTTTCATCCTGCTCTACCTAAATCTGTAATGGAACCTGAACTCCACGTGAATGTTGCAAGGAAGAATCATTCTGCTATGTTGGCTTCCACATCAGAGTCTGAAATTGTAACAACAGTGATTAATGAGATTTCCCATTCTCAATTGGAAGACACCAAAACTATAACAATGGAAACAAATAACCCAATTGAGAAAACTATGGAAGTTGAAGGAGATTTAAATGCTGAAAGGGATGATGATGATGATGGTGATTCGTGGGAAGCTGAAGAACCTTCCGGATTTGTGTTAGCAAATGTACCATCTTCAACATCAGATGGCCCTGCATCATTCAGGTGTCTTAATGGAAAGAGTGACGAAGGAGGGAATAGCTTTGGAAGTCTTTCGAGAATAGAAGGCTTAGGGCGTGCAGCAAGGCGTCAGCTAGCTGCTGTTCTTGATGAATTCTGGGGACAACTATTTGATTTATATGGCCATATAACCCAGGAAGCAAAGGCTAATAAAATTGACGTTTTGCTGGGAGTGGGTGTCGATTTAAGACCTACCAGTTCTTTGCAAAAAGTGGATGTATGTAGAAAGGACTACTCTGAATACTCAGGATCTTTAGGAGGTATAGTTTCTAACACTTCAGCGAACTCTGATCTATATGATTCTTCCAAGCAGCCTTTGATGCAATGTAATTCAGAGTCTTCTTATGGCCTCCAAAGGAGTACTTCCTCAATGCAGCCAGATCACATCCAATTATTGGATGCTCATGTGCAGAACTCGAGCCACAATCTCCTTGATTCTGGTGAGAGGCGCTATTTCAGTGTACGTAATCTACATTCATCAGAGACTCGGGATTATCAACCAGCTACCATACATGGTTATCAGACTGCATCTTATCTTAGTCGACTTGGTAAAGACGGAGATTCTGCTAACCTAAATGGTCCAGTGGACTTGTCATCACTGAAATCCCCTTCGATAGTTAATGCAAAGTACAGGGAGTCTCTTGCGTTTGCTTTGGGGAAAAGGTTGTGTACTGGTCCAAGTGTAGGCCAACCCCCTGGGTTCCCAAAAGTAGCTATCACTAGAGATTGCCAATTACAATCTGAGAGGTCTTATAACGATTTCTACCCTTCTGGATCTGTAGATAATACACTCAACTCAGTTAATACTAAAAAGTACCACAGTTTGCCAGACATTTCAGGATACTCCATCCCCCACAGGTCTGCTTATGTGTCTGATAAAAATGCTCCATGGGATGGTTCTGTTGGACATGGATCTCATGCTAGTAGGACTTGTTATGAAAGACCACCATATTCAAATTCTGGAACAAGAACAGGGAGTCATTTGGCCTTCAATGAACTCTCTTCATCCAAAGATTACAACGAGGCAGTCTCTTCACAGTTGAGCTCTGGTTTTGATGCTGGATCTGTACGGTCTAGACTGCCTTGTGAGCAGTTTGGGCCTGAGAAAAATAGTAATATTGTTATGGAAGGTGTGAGAAATAGGCCTAATGCAATAGTTCAGGAAACTATGGATATAGAGAAGAAACTTCTTCTGTCAGTTAGACTTTGCATTGTGAAGCTCTTAAAATTGGAGGGTTCGGAGGGTTTGTTTAGAAAGAATGGTGGAGCTGATGAGGATTTGATTGATTGTGTCGCCTCGAGGGAGAAGGTTATTTGTGAATTTGAAACTAGGGAGACGAGTCAAGTAAATCATGTGGGTGAAGCTCACTATTGTCTTTCTGATAGGAAACTTTGTTTTTCTTCGTCTCCAGTTCCTAATTGCGGGGAGGGATGTATATGGAAAAGTGATTTAATAATAAGCTTTGGGGTGTGGTGTATCCACAGTATTCTTAACCTTACACTTGTGGAAAGCCGGCCGGAGCTTTGGGGGAAATACACCTATGTTCTCAATCGCCTCCAGGGCATCATTGATCCAGCTTTCTTTAAGCCTCGTAGTCCTTTGGCCCCATGCTTTTGCCTTCAAGTTCTACCCGCGCATCAGCGAAAGTTAAACCCCCATCTCTCAAACGAGATGCTACTCCCAACTGCAAAACCCAGCAGGGGCAAATGCACAACTGCATCAGCGTTGCTTGAGCTTATCAAGGATGTGGAGCTTGCGATCTCAAGCAGGAAAGGACGTACAGGAACTGCTGCAGGTGATGTTGCTTTCCCTAAGGGGAAGGAAAATTTGGCGTCTGTTCTCAAACGGTACAAGCGGAGGTTATCTAATAAGCCACCGGGCACTAATGAAGGCACAGGTTCACGAAAGACCCCACGTAATTACCTTACAACCAGTAGCATTTGCATTGACAGAATCGGTGCTAGTTGA 3909 0.4211 MISRSKMEAERLSPNHPPSFLRQSLPAIVPMLLISTGYVDPGKWVATVEGGARFGFDLMAFMLIFNFAAIFCQYISARIGVVTGKNLAQICSDEYDTWTCMLLGVQTELSVIMLDLNMILGMAQGLNLIFGWDLFSCVFLAATGVVFHILLAVLLDIEKAKFLGQFVAGFVLVSFILGMLINQPEIPFSMNGILIRLSGESAFVLMSLLGANLVPHNFYLHSSIVQWHQGPASISKNALCHNHFFAILCVFSGLYLVNNMLMTSSANEFYSTGHVLLTFQDALSPMEQVLRNPIALLGFLLLLFLANQITALSWSLGGEVVVQGFLKLDIPGWLHYATIRVITVLPALYFVWTSGAEGMYQLLLFTQVLVALQLPSLVIPLFRVATSRSIMGVHKISQFLELLALIIFIGMLGLNIVFVVEMMFGNSDWASDLRWNVGSGVSISYLVLLTTSVSSLCFMLWLAATPLRSVSVRLDSKTWNWDMPNTLPNPPNIGEKSYLSETRCREDEPMHVQEPTPAVTKTLEYSDVSHPSFHPALPKSVMEPELHVNVARKNHSAMLASTSESEIVTTVINEISHSQLEDTKTITMETNNPIEKTMEVEGDLNAERDDDDDGDSWEAEEPSGFVLANVPSSTSDGPASFRCLNGKSDEGGNSFGSLSRIEGLGRAARRQLAAVLDEFWGQLFDLYGHITQEAKANKIDVLLGVGVDLRPTSSLQKVDVCRKDYSEYSGSLGGIVSNTSANSDLYDSSKQPLMQCNSESSYGLQRSTSSMQPDHIQLLDAHVQNSSHNLLDSGERRYFSVRNLHSSETRDYQPATIHGYQTASYLSRLGKDGDSANLNGPVDLSSLKSPSIVNAKYRESLAFALGKRLCTGPSVGQPPGFPKVAITRDCQLQSERSYNDFYPSGSVDNTLNSVNTKKYHSLPDISGYSIPHRSAYVSDKNAPWDGSVGHGSHASRTCYERPPYSNSGTRTGSHLAFNELSSSKDYNEAVSSQLSSGFDAGSVRSRLPCEQFGPEKNSNIVMEGVRNRPNAIVQETMDIEKKLLLSVRLCIVKLLKLEGSEGLFRKNGGADEDLIDCVASREKVICEFETRETSQVNHVGEAHYCLSDRKLCFSSSPVPNCGEGCIWKSDLIISFGVWCIHSILNLTLVESRPELWGKYTYVLNRLQGIIDPAFFKPRSPLAPCFCLQVLPAHQRKLNPHLSNEMLLPTAKPSRGKCTTASALLELIKDVELAISSRKGRTGTAAGDVAFPKGKENLASVLKRYKRRLSNKPPGTNEGTGSRKTPRNYLTTSSICIDRIGAS* 1303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0417 1302 MobiDBLite consensus disorder prediction 948 972 - -
Vra3g0417 1302 PANTHER ETHYLENE-INSENSITIVE PROTEIN 2 20 1175 - -
Vra3g0417 1302 Pfam Natural resistance-associated macrophage protein 44 397 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vra3g0417 1302 PRINTS Natural resistance-associated macrophage protein signature 103 129 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vra3g0417 1302 PRINTS Natural resistance-associated macrophage protein signature 205 228 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vra3g0417 1302 PRINTS Natural resistance-associated macrophage protein signature 307 326 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vra3g0417 1302 PRINTS Natural resistance-associated macrophage protein signature 367 386 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vra3g0417 1302 MobiDBLite consensus disorder prediction 1272 1287 - -
Vra3g0417 1302 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 20 1175 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vra3g0417 1302 PIRSF EIN2 7 1293 IPR017187 GO:0009873
Vra3g0417 1302 MobiDBLite consensus disorder prediction 1264 1287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0417 Vra-Chr3 4813392 4824823 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0417 7 1288 Miscellaneous Gene Families AT5G03280 49.543 0.0 1150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0417 - K14513 gmx:100813034 1972.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0417 3 4813392 4824823 Vra8g2134 8 39578549 39586493 PCT