Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2130 ATGGGCATACTCTACGAAGACGTGGTGATCATAAGCCAGCCACAAAAAGACGGCGACCCAACTGTTCTCACTGTCAATTGCCCTGACAAAACTGGTCTGGGCTGTGATTTGTGCCGCATCATACTCTTCTTTGGTCTCAACATACTAAGAGGAGATGTTTCAACGGATGGGAAATGGTGCTACATAGTTTTCTGGGTGGTTGGGAAAAACAGGACGAGGTGGAGTTTGCTGAAGCAGAGGCTGATTGAGGCATGCCCTTCTTGCTCCTCGGCTTCTGGAATCTCTTATTATCGATCTGAGTTGCAGCCCTCCAAGCCTCCTGATGTCTTTCTTTTGAATTTTTGCTGTCATGACCGGAAAGGGCTTTTGCATGATGTTACTGAGGTTCTTTGTGAGCTAGAACTTACTATAAAGAAAGTGAAGGTATCTACTACACCTGATGGCAAAGTGATGGATCTGTTTTTCATCACAGATACCAGAGAACTTCTACACACAAAGAAGAGAAAGGACGAAACAATTGAACATCTAACAGAGATTTTGGGGGATGCCATAATTTCTATTGACATAGACTTGGTTGGCCCAGAAATTACAGCTTGTACCCAGGCATCTCCATTACTTCCAACTGCAATCACAGAAGATGCCTTTGATTTGGAATTGCCCGATTTGGCTCGGGGAGGAACTTTGAGGTCAGATTATGTTTCTGTGATGATGGACAATACGCTTAGTCCTGCTCACACCCTTGTCCAAATTATGTGCCAAGATCACAAAGGTCTACTTTATGACATCATGAGAACTCTGAAAGACTACAACATTCAGATTTCTTATGGGCGTTTCACTACAAAACCTAGAGGAAAATGTGAGATTGACTTGTTCATCATGCAAGCAGATGGCAAAAAGATTGTTGACCCAAACAAGCAGAATTCATTGGCATCACGGCTTAGAATGGAACTATTTCGACCACTCAGGGTAGCCATTGTGAGTAGGGGCCCGGATACCGAGCTTCTGGTCGCAAATCCAGTGGAGTTATCTGGCAAGGGCCGACCTCTTGTTTTTCATGATATCACTCTTGCACTCAAAATGCTAGGCACTTGCATATTTTCGGCTAAAGTTGGGAGACACGTAATTGGAGATCGTGAGTGGGAGGTTTATAGAGTCTTGCTTGATGAAGGGGAGGGGTTATCTTTTCCAAAGAACAAGATTGAGGAGGGAGTTTGGAAAATGCTGATGGGTTGGGAGTAA 1239 0.4415 MGILYEDVVIISQPQKDGDPTVLTVNCPDKTGLGCDLCRIILFFGLNILRGDVSTDGKWCYIVFWVVGKNRTRWSLLKQRLIEACPSCSSASGISYYRSELQPSKPPDVFLLNFCCHDRKGLLHDVTEVLCELELTIKKVKVSTTPDGKVMDLFFITDTRELLHTKKRKDETIEHLTEILGDAIISIDIDLVGPEITACTQASPLLPTAITEDAFDLELPDLARGGTLRSDYVSVMMDNTLSPAHTLVQIMCQDHKGLLYDIMRTLKDYNIQISYGRFTTKPRGKCEIDLFIMQADGKKIVDPNKQNSLASRLRMELFRPLRVAIVSRGPDTELLVANPVELSGKGRPLVFHDITLALKMLGTCIFSAKVGRHVIGDREWEVYRVLLDEGEGLSFPKNKIEEGVWKMLMGWE* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2130 412 SUPERFAMILY ACT-like 19 79 IPR045865 -
Vra8g2130 412 SUPERFAMILY ACT-like 107 179 IPR045865 -
Vra8g2130 412 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 2 412 IPR040217 -
Vra8g2130 412 ProSiteProfiles ACT domain profile. 111 194 IPR002912 -
Vra8g2130 412 PANTHER FOUR ACT DOMAIN ACT DOMAIN PROTEIN WHICH PROTEIN 2 412 - -
Vra8g2130 412 Pfam ACT domain 111 167 IPR002912 -
Vra8g2130 412 SUPERFAMILY ACT-like 244 296 IPR045865 -
Vra8g2130 412 Gene3D - 108 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2130 Vra-Chr8 39378773 39381819 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2130 - - gmx:100816138 783.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2130 8 39378773 39381819 Vra8g2130 8 39378773 39381819 ECH
Vra3g0442 3 5124088 5126952 Vra8g2130 8 39378773 39381819 PCT