Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0442 ATGGGGATACTGCACGACGACGTAGTGATTATCAGGGAGGCAGAGAAAGAAGGTGAAAGCACTGTAATAACAGTCAACTGCCCCGACAAGACCGGTCTCGGTTGTGATTTGTGTCGTATAATTCTCTTCTTCGGTCTTAGCATTGTACGGGGAGATGTGTCCACCGATGGAAAATGGTGCTACATAGTTTTCTGGGTGGCGGGGAAGCAAAGGACTAGTTGGAGTTTGTTGAAGAAGAGGCTAATTGAGGCGTGTCCTTCTTGTTCCTCAGCTTCTGGGATTTCGTATTACCGTTCAGAATTGCAGCCTCCTAAGCCCTCTGATGTGTTCCTCTTGAAATTTTGTTGCCATGATCGAAAAGGCCTTTTACATGATATTACAGAGGTTCTTAGTGAGCTAGAGCTCATCATACATAAAGTGAAGGTTTCTACTACACCTGATGGCAGAGTGGTGGATCTGTTTTTCATCACGGATACCAGGGAACTTCTACACACAAAGAAGAGAAGAGACGACACAATTGAACAGTTGTCAGTTGTTTTGGGGGATCCCTCAATTACCATTGACATTGAATTGGTTGGCCCAGAAATTACTGCTTCTTCTCAAGCATCTTCTTTCCTTCCTAGTGCAATCACAGAAGATATCTTTGATTTGGAATTACCTGCTTCATTACAAAGCGGGACTTCCACATCTGATTCTGTTTCTATTGTATTGGACAATTCGTTGAGTCCTGCTCATACGCTCGTCCAAATTATATGTCCAGATCACAAAGGTCTTCTTTATGACATCATGAGAACTCTGAAGGACTACAATATTCAGATTTCTTATGGGAGATTCTCAACAAAACCCAGAGGAAAATGTGAGCTTGACTTGTTCATAGTGCAAGCAGATGGGAAAAAAATAGTTGACCCCAACAAGCAGAAGTCTTTGTCATCACGCCTTAGGACTGAACTACTTCGTCCCTTCAGAGTAACCGTTGTAAGCAGGGGCCCTGATACGGAGCTGCTGGTTGCAAACCCTGTGGAGTTATCTGGCAAAGGACGACCCCTTGTTTTCTATGACATTACTCTTGCTCTCAAAATGCTTGGCCCCGGCATCTTCTCGGCTGAAGTTGGAAGACACGTGATTGGAGATAGGGAGTGGGAAGTTTACAGAATCTTGCTTGATGAGGGGGAGGGTTCATCTGTTCCGAGGAACAAGATTGAGAAAGGAGTTTGGAAGATGTTGATGGGTTGGGTGTGA 1239 0.4439 MGILHDDVVIIREAEKEGESTVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVSTDGKWCYIVFWVAGKQRTSWSLLKKRLIEACPSCSSASGISYYRSELQPPKPSDVFLLKFCCHDRKGLLHDITEVLSELELIIHKVKVSTTPDGRVVDLFFITDTRELLHTKKRRDDTIEQLSVVLGDPSITIDIELVGPEITASSQASSFLPSAITEDIFDLELPASLQSGTSTSDSVSIVLDNSLSPAHTLVQIICPDHKGLLYDIMRTLKDYNIQISYGRFSTKPRGKCELDLFIVQADGKKIVDPNKQKSLSSRLRTELLRPFRVTVVSRGPDTELLVANPVELSGKGRPLVFYDITLALKMLGPGIFSAEVGRHVIGDREWEVYRILLDEGEGSSVPRNKIEKGVWKMLMGWV* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0442 412 ProSiteProfiles ACT domain profile. 111 194 IPR002912 -
Vra3g0442 412 PANTHER FOUR ACT DOMAIN ACT DOMAIN PROTEIN WHICH PROTEIN 2 411 - -
Vra3g0442 412 Pfam ACT domain 112 168 IPR002912 -
Vra3g0442 412 SUPERFAMILY ACT-like 18 81 IPR045865 -
Vra3g0442 412 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 2 411 IPR040217 -
Vra3g0442 412 SUPERFAMILY ACT-like 244 298 IPR045865 -
Vra3g0442 412 ProSiteProfiles ACT domain profile. 247 330 IPR002912 -
Vra3g0442 412 SUPERFAMILY ACT-like 107 186 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0442 Vra-Chr3 5124088 5126952 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0442 - - gmx:100818216 764.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0442 3 5124088 5126952 Vra3g0442 3 5124088 5126952 ECH
Vra3g0442 3 5124088 5126952 Vra8g2130 8 39378773 39381819 PCT