Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2126 ATGTTCAAGAAAATCATGAAAGGCGGGCACAAGAAGCCCTCCAAGTCCGACGCAAGCGATCCCGTGTCTGCGGCGTTCGTCGCCGCCAACCGCAACTTGCCGGCGTTGCCCTCGCCCAATGTCGTCGTGAACCATGCCTCGCGCGGAACTGGAGGTGCGGCGCCTCCTAGCTCCGGCACCGCGATGCCGCTTGTTCCTACCCCTGGGGCAATGGAGCCTTTGCCGCCATTCCGCGATACGCCGGTCGCTGACCGGCAGAACCTCTTCCTCCGGAAGCTCCACATCTGCTGCTACGTCCTGGACTTCTCCGACACGCTGAAGAACGTTAGAGAGAAGGAAATCAAGCGCCAAGCGCTGATGGACCTCGTCGACTTCATCCAATCCGGCTCCGGCAAGATGTCGGAGCATTGCCAGGAGGAGATGATCAGAATGATCTCAGTCAACATTTTCCGGTGCCTTCCTCCGGCGTCTCACGAGAACACCGGCCAGGAACCCACCGATCCTGAAGAGGAGGAACCAAGTATGGATCCGACCTGGCCTCACCTTCAGCTCGTCTACGAGCTTCTCCTCAGATACGTGGTTTCCTCTGATACCGATACGAAAATCGCAAAACGGTATATTGACCACTCCTTTGTTCTCAAATTGCTTGATTTGTTTGACACTGAGGACCCGCGGGAGAGGGAGTATTTGAAAACCATACTGCATCGTATATACGGGAAATTCATGGTGCATAGACCGTTTATTAGAAAGGCTATTAACAACATTTTTTATCGGTTCATATATGAGACTGAGCGGCACTCTGGTATTGGAGAGCTTCTGGAGATTCTTGGGAGCATTATTAATGGGTTTGCGCTGCCCATGAAGGAGGAGCACAAGTTGTTTCTCGTGAGGGCTCTTTTGCCTCTGCACAAACCGAAATCTGTGTCCATGTACCACCAGCAGTTGTCTTACTGCATTACTCAGTTTGTGGAGAAGGATTTCAAGCTGGCAGATACGGTGATTAGGGGGTTGTTGAAGTATTGGCCTCTTACCAATTGCCAGAAGGAGGTTCTCTTCCTTGGAGAACTGGAGGAAGTGCTGGAGGTCACGCAGGCTGCGGAGTTTCAAAAATGTATGGTTCCGCTTTTTAGACAGATTTCACGCTGCCTCAATAGCTCTCACTTTCAGGTTGCAGAACGAGCCCTGTTTTTGTGGAACAATGAGCATATCGTGAGCTTAATTGCCCAAAACAGGACGGTGGTACTACCAATAATATTTGAAGCATTTGAGAAAAACATCTCGAGTCATTGGAATCAAGCAGTACATGGACTGACGGTGAATGTTCGCAAAATGTTCCTGGAAATGGATGCAGAATTGTTTGAAGAGTGCCAGCGGCAGCACGCAGAGAAAGAGGCTAAAGCCAAAGATGTAGAAGAGCAGCGGGAACTTAATTGGAAGAGACTGGAAGATGCGGCTGCACAGAATGGATTTGAGGATATGGTCTTAACTTAG 1491 0.5044 MFKKIMKGGHKKPSKSDASDPVSAAFVAANRNLPALPSPNVVVNHASRGTGGAAPPSSGTAMPLVPTPGAMEPLPPFRDTPVADRQNLFLRKLHICCYVLDFSDTLKNVREKEIKRQALMDLVDFIQSGSGKMSEHCQEEMIRMISVNIFRCLPPASHENTGQEPTDPEEEEPSMDPTWPHLQLVYELLLRYVVSSDTDTKIAKRYIDHSFVLKLLDLFDTEDPREREYLKTILHRIYGKFMVHRPFIRKAINNIFYRFIYETERHSGIGELLEILGSIINGFALPMKEEHKLFLVRALLPLHKPKSVSMYHQQLSYCITQFVEKDFKLADTVIRGLLKYWPLTNCQKEVLFLGELEEVLEVTQAAEFQKCMVPLFRQISRCLNSSHFQVAERALFLWNNEHIVSLIAQNRTVVLPIIFEAFEKNISSHWNQAVHGLTVNVRKMFLEMDAELFEECQRQHAEKEAKAKDVEEQRELNWKRLEDAAAQNGFEDMVLT* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2126 496 Gene3D - 81 484 IPR011989 -
Vra8g2126 496 Coils Coil 453 473 - -
Vra8g2126 496 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 489 IPR002554 GO:0000159|GO:0007165|GO:0019888
Vra8g2126 496 MobiDBLite consensus disorder prediction 1 20 - -
Vra8g2126 496 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 74 485 IPR002554 GO:0000159|GO:0007165|GO:0019888
Vra8g2126 496 PIRSF PP2A_B56 10 494 IPR002554 GO:0000159|GO:0007165|GO:0019888
Vra8g2126 496 PANTHER PROTEIN PHOSPHATASE 2A REGULATORY B SUBUNIT FAMILY PROTEIN 1 489 - -
Vra8g2126 496 SUPERFAMILY ARM repeat 86 467 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2126 Vra-Chr8 39188919 39196191 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2126 K11584 - gmx:100795277 867.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2126 8 39188919 39196191 Vra8g2126 8 39188919 39196191 ECH
Vra3g0446 3 5166550 5172370 Vra8g2126 8 39188919 39196191 PCT