Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1935 ATGGGCTTAGTTTGCAGCAGCAGAGAGGAAATGCAGAAAATGAAGAACCTTGGTAGCATTGGAAGCAGTGGGAGGCTATCAGCAGAAGAGTATGAGGATGAGGATATTTCAAAGCTTGCCATCTCCACGTTTCAGTCTAAGGAAGAAGAAATTGAGAGGAAAAAAATGGAGGTCAGAGAGAAAGTTGAACTCCAACTTGGTCGTGCTGAAGAAGAGACTAGGCGCTTGGCGCGCATTTGGGAAGAACTTGAAGTGCTTGATGATCCCATGAGGAAGGAAGTTGCAATGTTACGCAAGAAGATTGACTTGGCTAACAGAGATTTAAAGCCACTGGGACTTAACTACCAGAAAAAGGAGAAAGAGTGTAAAGAAGCCTTGGAAGCTTTCAACGAAAAAAACAAAGAGAAGGCTCATCTGGTTGCTACACTAGTTGAGATGTTGACTGAGAGTGAAAGAATGAGGATGAAGAAACTGGACGAGCTATGCGAGACAATAGAGTCTCTGTCTCTGAAACCATAA 519 0.4335 MGLVCSSREEMQKMKNLGSIGSSGRLSAEEYEDEDISKLAISTFQSKEEEIERKKMEVREKVELQLGRAEEETRRLARIWEELEVLDDPMRKEVAMLRKKIDLANRDLKPLGLNYQKKEKECKEALEAFNEKNKEKAHLVATLVEMLTESERMRMKKLDELCETIESLSLKP* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1935 172 Pfam Transcriptional activator 15 167 IPR007033 -
Vra8g1935 172 Coils Coil 41 61 - -
Vra8g1935 172 PANTHER RAB6-INTERACTING PROTEIN GORAB 11 167 IPR007033 -
Vra8g1935 172 Coils Coil 115 135 - -
Vra8g1935 172 PANTHER RAB6-INTERACTING GOLGIN (DUF662) 11 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1935 Vra-Chr8 36870328 36872171 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1935 - - gmx:100794044 292.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0520 3 5850280 5852361 Vra8g1935 8 36870328 36872171 ECH
Vra8g1935 8 36870328 36872171 Vra8g1935 8 36870328 36872171 ECH