Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1716 ATGGCCCTCGAAACGCTCCTTGTTAAGGTCAAAACCGCCATATCAAATAGCTTCGACTCTGTTCCGCCCAAGCTGCTGAAGAAGAAACCCTCGTTCAAGTCCAAACCAAACGTCGGCGTGTTGGCGTTCGAGATCGCCGGCGTCATGTCCAAACTCCTCCATCTCTGGCACTCGCTGTCCGACGCCACCATCGTCCGCATCCGAAACGACGCCGTCAACCTCGAGGGCGTCAGGAAGATCATCTCTAACGACGAGTCCTTCCTCCTCGGACTCGCCTGCGCCGAGTTCGCCGAGTCGCTCCGTGTCGTCGCGAACTCGGTGACCCGACTCGGCGCGCGCTGCGAGGACCCCAACCTGCGCTCCTTCCAGCGGGCCTTCCTCGAGTTCGCGGACTCGGGCTGCGACCCAAAAGGGTGGGCCCTTCCGGGCCCAAAAGAAATCGAATCAAAGCTCAAGAAAATGGAGCGTTACGTGACGCTTACGGCAGCCCTCTACCGCGAAATGGAGGAGCTCACGGTTCTGGAAAGCGGCTTCCGAAAAGCTCTGATCCACGCTGACGCCAACAACGTTGGGAGTAAAGACCAGCAAAAACTCTATGAATTTCAGCAGAAGATTTTCTGGCAGAAGCAAGAGGTGAAGGATCTCAAAGAAAGATCCCTGTGGAGCAGGAGCTTCGACAGCGTTGTCGTGCTCCTTGTAAGGTTCAGTTTCACTGTTTTAGCAAGGATTAAGGTTGTCTTCGGAATCGGTCATCGCATGCCTTGTCTGTCACGTACCTTATCTACTTCGGCCACTGTTTATCCATCTGATCAAAACCCTAATGATTTTGTTGTTTCTGGGTTATTAGAGGAAGAGTCAAAGTTTGATGAAGCGGTAAACGAAGATATGGAAAGTGGGTTTTTTGAGGCCAACTCGAAGCTTCTTAAACCACCGGAGAGCACTTTGGGAGCTTCAGGTTTGGCTTTACACTATGCAAATTTGATAATAGTGATGGAGAAGATGATAAAGTCACCTCACTTGGTTGGAGTAGATGCAAGAGATGATTTATATGGTATGTTGCCGAGGAGCATAAGGTGGGCGTTGAGAGGGAGACTGAGAGGGGTTGGGTTTTGTGCTAGTGATCCTGCTCTTGCTGGAGAATGGAGGGACGCCTTGGGAAGGATATTGGGATGGTTATCACCTTTGGCACACAACATGATCAAATGGCAAAGTGAGAGAAGCTTTGAACAACACAATTTGGTGGCCAAGACCAATGTATTGCTGTTACAGACTTTGTTCTTCGCCAACAAAGATAAGACTGAGGCTGCCATAACTGAACTTCTGGTGGGGTTGAACTATATTTGGAGGTTTGAGAGGGAAATGACTGCTAAGGCTTTGTTTGAATGCGCCAATTCTAATGGGCTTTTGTTCAAGTTGAATAAACCAGCTAATGAGATATGA 1440 0.4979 MALETLLVKVKTAISNSFDSVPPKLLKKKPSFKSKPNVGVLAFEIAGVMSKLLHLWHSLSDATIVRIRNDAVNLEGVRKIISNDESFLLGLACAEFAESLRVVANSVTRLGARCEDPNLRSFQRAFLEFADSGCDPKGWALPGPKEIESKLKKMERYVTLTAALYREMEELTVLESGFRKALIHADANNVGSKDQQKLYEFQQKIFWQKQEVKDLKERSLWSRSFDSVVVLLVRFSFTVLARIKVVFGIGHRMPCLSRTLSTSATVYPSDQNPNDFVVSGLLEEESKFDEAVNEDMESGFFEANSKLLKPPESTLGASGLALHYANLIIVMEKMIKSPHLVGVDARDDLYGMLPRSIRWALRGRLRGVGFCASDPALAGEWRDALGRILGWLSPLAHNMIKWQSERSFEQHNLVAKTNVLLLQTLFFANKDKTEAAITELLVGLNYIWRFEREMTAKALFECANSNGLLFKLNKPANEI* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1716 479 Pfam Domain of unknown function (DUF3475) 40 95 IPR021864 GO:0045927
Vra8g1716 479 Pfam Protein of unknown function (DUF668) 314 401 IPR007700 GO:0045927
Vra8g1716 479 PANTHER SIMILARITY TO UNKNOWN PROTEIN 1 466 - -
Vra8g1716 479 PANTHER BNAC09G50660D PROTEIN 1 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1716 Vra-Chr8 34335804 34338326 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1716 - - gmx:100787581 815.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g1716 8 34335804 34338326 Vra8g1716 8 34335804 34338326 ECH
Vra1g0909 1 10602549 10603976 Vra8g1716 8 34335804 34338326 PCT