Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0909 ATGGCCCTCGAAACCTGGCTCATCAAGGTCAAAACGGCGCTGTCGCACAGCCTCACGAAGAAACCGTCGTTTTCCTCGTCGAAGCCAAAGCACGTCGCCGTTTTGTCCTTCGAGATCGCGAACGTGATGTCGAAGCTCCTCCACCTCTGGCAGTCCCTCTCCGACGCCAACGTCATTCGCCTCCGCAACGACGCCATCGCGCTCGAAGGCGTGCGCAAGCTCATCTCAAACGACGAGTCTTTTCTTCTAAGCCTCGCCGTGGCCGAGTTCGCCGACTCGCTCAGACTCGTTGCCAACTCGGTCTCCCGACTCAGCAACTACTGCCACGAACCTTCTCTCCGATCCTTCCACCGAATCTTCACCGAGTTCGCGAACTCAGGCCTCGACCCGCGCGCGTGGACCCTCACCACCCCGAAAGACATCGAAACCAAACACAGAAAATTGCAACATTACGTGACTCTCACGGCAACACTCCACAAAGAAATCGACGCTCTCACGCTCCTCGAAAGCGCGTTTAAAAAAGCGCTTCTCAACGCTGACAACGCCGCCACCGAACACTCCTCTCACAAAAAACTAAGCGATCTTCAGCAGAAGATTTTCTGGCAGAAGCAAGAGGTGAAGAACTTGAAGGAACGGTCGTTATGGAACAAAAACTTCGATGGGGTTGTTTTGTTGTTAGCAAGGTTTGTTTTCACCGTGTTAGCGCGGATTAAAGTTGTCTTCGGAATCGGCCATAGTAGTAGTGTTCCCTTTTTGTCACGTAGTTTGTCTTCCGTTTATCCCTCCGATCACCAAAACCCTATTTCTTCTTGCTCCTTTGTATCTGGGCCGTTGAAAAGCTCAAAACTTGACGACGAAAATGAAAATTTGGGAAATGGGTTTTTCGAGTCTAATTGCAAGGTGTTGAAGTTGAAGGGTGACGGTGACAGTGATACTTTGGGTGCTTCAGCTTTGGCCTTGCACTATGCAAACTTGGTAATGGTGTTGGAGAAGATGATAAAGTCACCCCAGTTGGTTGGGGTGGATGCCAGAGATGATTTGTATGGGATGTTACCAAGTAGCATAAGGTCATCTTTAAGGGCAAGATTGAGAGGGGTGGGGTTTTCTGCATGTGATGATCACGTGCTCGCCGGAGAATGGAGGGATGCATTGGGGAGGATTCTGGGGTGGCTGGCACCATTGGCACATAACATGATAAAGTGGCACAGCGAAAGAAGCTATGAGCAGCAGAACTTAGTACCAAAAACCAATGTGTTGTTGTTGCAGACTTTGTTCTTTGCAAACAAAGAGAAGACAGAAGCTGCCATCACTGAGCTGCTTGTGGGGTTGAACTATGTTTGGAGGTTTGAGAGGGAAATGACAGCTAAGGCATTGTTTGAATGTACCAAATTTAATAATGGCTTCTTAAGCTTGCACAAGCCCAGCTAA 1428 0.493 MALETWLIKVKTALSHSLTKKPSFSSSKPKHVAVLSFEIANVMSKLLHLWQSLSDANVIRLRNDAIALEGVRKLISNDESFLLSLAVAEFADSLRLVANSVSRLSNYCHEPSLRSFHRIFTEFANSGLDPRAWTLTTPKDIETKHRKLQHYVTLTATLHKEIDALTLLESAFKKALLNADNAATEHSSHKKLSDLQQKIFWQKQEVKNLKERSLWNKNFDGVVLLLARFVFTVLARIKVVFGIGHSSSVPFLSRSLSSVYPSDHQNPISSCSFVSGPLKSSKLDDENENLGNGFFESNCKVLKLKGDGDSDTLGASALALHYANLVMVLEKMIKSPQLVGVDARDDLYGMLPSSIRSSLRARLRGVGFSACDDHVLAGEWRDALGRILGWLAPLAHNMIKWHSERSYEQQNLVPKTNVLLLQTLFFANKEKTEAAITELLVGLNYVWRFEREMTAKALFECTKFNNGFLSLHKPS* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0909 475 PANTHER DUF3475 DOMAIN PROTEIN 1 474 - -
Vra1g0909 475 Pfam Protein of unknown function (DUF668) 312 400 IPR007700 GO:0045927
Vra1g0909 475 PANTHER BNAC09G50660D PROTEIN 1 474 - -
Vra1g0909 475 Coils Coil 192 212 - -
Vra1g0909 475 Pfam Domain of unknown function (DUF3475) 34 89 IPR021864 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0909 Vra-Chr1 10602549 10603976 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0909 - - gmx:100801628 816.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g0909 1 10602549 10603976 Vra1g0909 1 10602549 10603976 ECH
Vra1g0909 1 10602549 10603976 Vra8g1716 8 34335804 34338326 PCT