Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1714 ATGTCTAAACCTCAAAATGATCCCCTTCTGCAATCGGAAACAACTTGTGGAACACTTCTCTATGAGCTTCAGATAATATGGGACGAAGTTGGGGAGTCTGAAACTGACAGAGATAGAATGTTGTTTGAGCTTGAACAAGAGTGCCTAGAAGTATACAGAAGGAAGGTAGATCTGGCAAATCGATCTAGGGCTCAATTAAGGCAGGCAATCGCTGATTGTGAGGCAGAACTTGCCGCTATTTGTTCATCAATGGGAGAGAGACCAGTGCATATTCGTCAGACTGATCAAAATGTTGGTAGCCTCAAGGAAGAGCATGCAAGAATTCTTCCGCAGTTGGAGGAGATGCAAAAAAGGAAATCTGAGCGTAGAAATCAATTCATTGAAGTCCAAGAGCAGATTCAAAGCATTTCAATTGAAATACATGGTCCTAGAGAGTATATTCCCGCTGTCATAGATGAAACTGATTTATCCGTGAGAAAACTTGAAGAATTGCATAGGCAGTTACATGCACTTCAGATTGAGAAGAGTAGTCGCTTAAAGCAAGTCCAGGAGTACCTGTATACATTAAATTCTCTATGTTCAGTGCTTGGTTTGGACTTCAAGCAGACAATTAATGGAATTCATCCTAGTTTATTGGAATCAGAAGGATCTAAGAGTGTAAGTAATGACACCATTCAACAATTAGCGGTTGCTATAGAAGAACTGCGGGGGGTTAAATTGCAGAGAATGGAGAAGCTCCAAGACCTTGCTACTACAATGTTGGAGCTCTGGAACTTAATGGATACCCCTGTTGAAGAGCAACAGATGTTTCAGAATGTTACATGTAATATAGCCGCTTCAGAACATGAAGTAACTGAACCAAACACCTTGTCTGTGGAGTTCATCAATTTGGTTGAGGCGGAAGTAGCTAGGTTAGAAAAGTTGAAATCAAGCAAGATGAAAGAGCTTGTATTAAAGAAGAGAACAGAGCTGGAGGAGATTTGTCGAAAGACTCATTTGATTCCAGAAATAGACAATGCAGTGGAATATGCTGTTGAAGCCATAGAATCTGGTTCTGTGGACCCTGCTTGTGTGCTTGAACAAATTGAACTTCAGGTTGCCCAAGTCAAAGAAGAAGCTTTTAGCAGAAAAGAGATACTTGAAAGGGTTGAGAAATGGTTGGCAGCATGCGATGAAGAGTCTTGGCTTGAGGAGTACAACAGGGATGATAATCGATACAATGCTGGGAGAGGTGCTCATCTTACTCTCAAGCGAGCTGAGAAAGCTCGTGCCTTGGTCAACAAAATTCCAGCAATGGTGGATGGTCTGACTTCCAGAACTATTGCATGGGAGAAGGAAAAAGGCATTGAATTCACATATGATGGTATTCGTCTACTTTCTATGCTTGAAGAATACACTATATTACGCCAAGAGAAAGAACAAGAACGCCGTAGGCAGCGGGATTTGAAGAAACTACAGGGACAAATGATAGCGGAACAGGAGGCACTATATGGGTCAAAACCAAGCCCTTCCAAGCCCCAGAGTGTAAAAAAGGGGTCTAGGATGTCAACAGGAGGAGCAACTAGTAGGAGAGTCTCGCTTGGGGGAGCAATGCTTCAAACTCCAAAGCCTGATTTAAAAGCTACTCGTGCCATGAGAAAGACTGACAAAGGGCACCAAATTGAGCATTTAAATTACCTGGATGATGGCATTTCAGGTTTATCAGCAGCTAGAAGAGGGCTGGATATTGCTGGCGTTCCTGTTAAAAAGCACTCATTTGGTGCTGGAACTCAAATCATAGAATCTCCTCTGACACGACAACCTTTTTCTCCTATCTCTTCTAACAATGTAGCTTCAAAAGCTAATGTGGCAAATGCTACAGATGAACATAAACCGGGTGAGAAGTTGCAGAGAACACTGTCGCTTAACAATGTACCATTCACTACTCCCTCCAAGACAGCTACTACTTTGGTAGATGAAGAGAATAGAACTCCAAAGACAATGCCTATTCCTTTCCCAGCTACACCATCCACAGTATCAATTCCAATGAGTATGGCTATGACTCCAGTTCCTTCATCAATTATAAAGAATATAAACTTGAATTCAACTCTCACAAACACAGCAGTTCCTTATGGAAATGACTTGGTTCAAGAGATTGATTATTCCTTTGAGGAAAAAAGGCTCGCTTATATGATGTTAGCATGA 2184 0.4167 MSKPQNDPLLQSETTCGTLLYELQIIWDEVGESETDRDRMLFELEQECLEVYRRKVDLANRSRAQLRQAIADCEAELAAICSSMGERPVHIRQTDQNVGSLKEEHARILPQLEEMQKRKSERRNQFIEVQEQIQSISIEIHGPREYIPAVIDETDLSVRKLEELHRQLHALQIEKSSRLKQVQEYLYTLNSLCSVLGLDFKQTINGIHPSLLESEGSKSVSNDTIQQLAVAIEELRGVKLQRMEKLQDLATTMLELWNLMDTPVEEQQMFQNVTCNIAASEHEVTEPNTLSVEFINLVEAEVARLEKLKSSKMKELVLKKRTELEEICRKTHLIPEIDNAVEYAVEAIESGSVDPACVLEQIELQVAQVKEEAFSRKEILERVEKWLAACDEESWLEEYNRDDNRYNAGRGAHLTLKRAEKARALVNKIPAMVDGLTSRTIAWEKEKGIEFTYDGIRLLSMLEEYTILRQEKEQERRRQRDLKKLQGQMIAEQEALYGSKPSPSKPQSVKKGSRMSTGGATSRRVSLGGAMLQTPKPDLKATRAMRKTDKGHQIEHLNYLDDGISGLSAARRGLDIAGVPVKKHSFGAGTQIIESPLTRQPFSPISSNNVASKANVANATDEHKPGEKLQRTLSLNNVPFTTPSKTATTLVDEENRTPKTMPIPFPATPSTVSIPMSMAMTPVPSSIIKNINLNSTLTNTAVPYGNDLVQEIDYSFEEKRLAYMMLA* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1714 727 Pfam Microtubule associated protein (MAP65/ASE1 family) 18 507 - -
Vra8g1714 727 Gene3D - 365 499 - -
Vra8g1714 727 Coils Coil 295 315 - -
Vra8g1714 727 Coils Coil 112 132 - -
Vra8g1714 727 PANTHER 65-KDA MICROTUBULE-ASSOCIATED-LIKE PROTEIN 7 628 - -
Vra8g1714 727 MobiDBLite consensus disorder prediction 492 527 - -
Vra8g1714 727 Coils Coil 458 488 - -
Vra8g1714 727 MobiDBLite consensus disorder prediction 500 523 - -
Vra8g1714 727 Coils Coil 49 76 - -
Vra8g1714 727 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 7 628 IPR007145 GO:0000226|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1714 Vra-Chr8 34305292 34310588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1714 11 518 EF-hand Containing Proteins AT5G62250 57.915 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1714 K16732 - gmx:100777734 1244.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g1714 8 34305292 34310588 Vra1g0906 1 10553935 10559945 ECH
Vra8g1714 8 34305292 34310588 Vra8g1714 8 34305292 34310588 ECH
Vra1g0906 1 10553935 10559945 Vra8g1714 8 34305292 34310588 PCT