Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0906 ATGGCTAAACATCAAAAGGGTCTTCTTTTACAATCCAATACAACATGTGAATCTCTTCTTAACGAACTTCAGATAATATGGAATGAAGTCGGGGAGTCCGAGACTGAAAAAGATAGAATGTTGTATGAGCTTGAAGAAGAGTGTGTAGAAGTATATAGAAGAAAGGTAGATAAAGCAAATCGGTCTAGAGCTCAACTAAGGCAGGATATTGCTGATTCCGAGGCAGAGCTTGCATGTATCTGCTCAACAATGGGAGAGCGACCAGTGCATTTTAGACAGTTTGACAAAAAAACTGGAAGCTTGAAGGAAGAGCTGGCAAGAGTTCACCCAGAGCTGGAGGAAATGCGGAAAAGGAAGTTTGAGCGTAGAAATCAATTTATAGAAGTTCAAGAACAGCTTCAAAGTATCGCAAATGAGATTTATAGTACAGGAGAATATACTACAGCTGTTGTAGATGAAACTGATTTGTCATTGAGAAAGCTTGAAGAATTACACAGAGAGCTGCTTGCACTTCAGAAAGAGAAGAGTGAACGCCTCAAGAAGGTTCAAGACCAAATATGTACCTTGAATTCTCTCTGTTCAGTGCTTGGTTTGGACTTCAAGCAGACAGTCAGTGCAGTCCATCCTAGCTTAGGAATTTCAGAAGGTCCTAGGAGTGTCAATAGTGAAACCATAAATCAATTGGCTATTGCCATACAAGAACTGCGAAAAGTTAAACTACAGAGAATGCAGAGGCTTCAAGATCTAGCTTCAACAATGTTGGAGCTCTGGAATTTGATGGATACGCCTGTTGAAGAGCAACAGATGTTTCAGAATGTTACTTGTAATATCGCTGCTTCAGAAGATGAAGTAACGGAACCAAACAGCTTGTCTGAGAACTTCATCAACTATGTCGAGGCAGAAGTATCCAGGTTAGAAGAGTTAAAGTCAAGCAAAATGAAAGAGCTTGTTTTGAGGAAAAGAGCAGAGCTAGAGGAGATTTGTCATAAGACTCATTTGATTCCAAAAATTGATAGTGCAGTGGAACACGCTGTTGAAGCGATAGAATCTGGAGCGGTAGACCCATCTTGTGTGCTTGAACAGCTTGAACTTCAGATTGCCTCTGCAAAAGAGGAAGCTTTTGTCAGAAAAGAAATACTTGAAAAAGTTGAGAAATGGTTAACAGCACGTGAAGAAGAATCTTGGCTTGAGGAGTACAACATGGATGAAAATCGATACAATGCTGGGAAAGGTTCTCATCTTACTCTCAAGCGAGCGGAGAAAGCCCGTGCCTTGGTCAGCAAACTACCAGCAATGGTAGAGGCTTTAACTTCAAAGACTATAGCATGGGAAAAAGACAAAGGCATTGAGTTCACATATGATGGTACCTGTCTGATCTCTATGCTTGAGAATTACTCGCTATCAAGGCAAGAGAAGGAGCAAGAACGTCGTAGGCAGCGGGAACTGAAGAAACTTCAGGGACAAATAACAGCGGAAAAGGAAGTACTCTATGGGTCAAAGGTAAGCCCTTCAAAGGCCCAGAGTGCAAAAAAGACACCTAGATCTGGAAGCGCAGCATGTAGAAAAATCTCCCTTGGATGTCAGACACCAAAATCTGATTCGAAACATTATCAGTCACAGTCATCCTTCATAAAGAGGACAGACAAAGCCCACCAAAATGATCGACTAAATAATCTGGATGATGATGTTTCATGTTTATCATCAGCTAGAAGAGGACTTGATACTGCTCGTGAAATGGAATCTCCACCTTTTTCTCCCATTTCTTTAATGGTATCATCGAAAGCTAATGATGCAAATGCTGTAGATGATATACAGAACAAGAAGTTGCAGAAAACATTAGTACTTAGCAACTTTCCATCCATCAGTGTACTACATCAAAGACAACCACAGTGGTGGATGAAGAAAATAGAACTCCTATGA 1920 0.4073 MAKHQKGLLLQSNTTCESLLNELQIIWNEVGESETEKDRMLYELEEECVEVYRRKVDKANRSRAQLRQDIADSEAELACICSTMGERPVHFRQFDKKTGSLKEELARVHPELEEMRKRKFERRNQFIEVQEQLQSIANEIYSTGEYTTAVVDETDLSLRKLEELHRELLALQKEKSERLKKVQDQICTLNSLCSVLGLDFKQTVSAVHPSLGISEGPRSVNSETINQLAIAIQELRKVKLQRMQRLQDLASTMLELWNLMDTPVEEQQMFQNVTCNIAASEDEVTEPNSLSENFINYVEAEVSRLEELKSSKMKELVLRKRAELEEICHKTHLIPKIDSAVEHAVEAIESGAVDPSCVLEQLELQIASAKEEAFVRKEILEKVEKWLTAREEESWLEEYNMDENRYNAGKGSHLTLKRAEKARALVSKLPAMVEALTSKTIAWEKDKGIEFTYDGTCLISMLENYSLSRQEKEQERRRQRELKKLQGQITAEKEVLYGSKVSPSKAQSAKKTPRSGSAACRKISLGCQTPKSDSKHYQSQSSFIKRTDKAHQNDRLNNLDDDVSCLSSARRGLDTAREMESPPFSPISLMVSSKANDANAVDDIQNKKLQKTLVLSNFPSISVLHQRQPQWWMKKIELL* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0906 639 PANTHER 65-KDA MICROTUBULE-ASSOCIATED-LIKE PROTEIN 7 616 - -
Vra1g0906 639 Gene3D - 366 499 - -
Vra1g0906 639 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 7 616 IPR007145 GO:0000226|GO:0008017
Vra1g0906 639 Coils Coil 462 482 - -
Vra1g0906 639 MobiDBLite consensus disorder prediction 500 519 - -
Vra1g0906 639 MobiDBLite consensus disorder prediction 529 546 - -
Vra1g0906 639 Pfam Microtubule associated protein (MAP65/ASE1 family) 17 514 - -
Vra1g0906 639 MobiDBLite consensus disorder prediction 529 556 - -
Vra1g0906 639 Coils Coil 158 181 - -
Vra1g0906 639 Coils Coil 49 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0906 Vra-Chr1 10553935 10559945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g0906 11 543 EF-hand Containing Proteins AT5G62250 55.699 9.59e-180 519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0906 K16732 - gmx:100777734 808.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g1714 8 34305292 34310588 Vra1g0906 1 10553935 10559945 ECH
Vra1g0906 1 10553935 10559945 Vra1g0906 1 10553935 10559945 ECH
Vra1g0906 1 10553935 10559945 Vra8g1714 8 34305292 34310588 PCT