Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1711 ATGGCTTCCACCATCGCTCCCTCAATGCCTTCCACCTCCACCGACCCCGACCCCGACGCTGCCGTCAGGGCGGTTAGGAAGCGCTACGAGGGCCTTCTCACAGTGCGCACGCGCGCGATCAAAGGCAAAGGCGCGTGGTACTGGGCCCATCTCGAGCCCACTCTCCTCGGCAACGCGGTCAAGCTCAAGTGCTCCCTCTGCGACTCTCTCTTCTCCGCCTCCAACCCTTCTCGAACCGCTTCTGAGCATCTCAAGCGTGGTACGTGTCCCAATTTCAACCACTCCTCCTTGCCTTCACCTTCTCCTATTTCCACCGTCCTCTCCCACTCCAACAACGGCAGAAAGAGAACCTCCTCCTCAGCCTCTCCGAATCAGGACCGCTCCGTTCAGCATTTGATGTTGTCTGGAGGGAAAGATGATTTGTGTGCTCTCGCGGTTTTCGAGGATAGTGTCAAGAAGCTCAAGAGTCCTAGGAATTTGTCGCATGTTGCTCCTCCTGAGTTGACCCAGGACCAGGTTAACTCCGCTGTTGAATTATTGGCAGATTGGTTCTACGAGTCTTGTGGTTCTGTGCCTCTCTCTTCTCTTGAACACCCCAAGTTTCAGTCCTTTCTCACCCAGCTGGGTTTGCCGGTGACTCTGTTGAGACGCGAGATATATTGTTCTAGGCTCGAGGATAGGTTCGGGGCGGTCAAGGCCGAGTCCGAAGCTAGAATCCGAGACGCACTGTTTTTTCAAGTGGGGTGTGATGGTTGGAAGGGCGAGGATGGTGTGGCGAAGTTCATAGTGAACCTTCCCAATGGGACTAGCGTGTTCCACAAGGTGGTGCTTGGTGGGGAGGTGGTGTCGTCTAAGTATGCTGAGGAGATTTTGTGGGAGGTGGTGAAGGGTGTTTGTGGAAGTGATGTGCAGAGGTGTGTTGGGATTGTTGCCGACAGGTTTAAGGGCAAGGCGTTGAGGAACTTGGAGGTTCAGAACCATTGGATGGTGAATGTTGCTTGTCAGGTTCAGGGATTCACGGGTTTGATCAAGGATTTTAGCAACAACTTACCACTTTTCAGGGTTGTCACCGAGAATTCTCTCAAGGTTGCTAATTTTATCAACACCGAGTCTCAAGTTAGGGGTAGTTTTCTAAGGTACCGAATGCAGGAACTGGAATGTGCTGGGCTGGTTCGGGTTCCCTCTCCCAAATGTAACGTGTTCAAGGATTTTACGTCTGTGTTTCCAATGCTGGAGGACATCCTGAGATGTGCTGCCGTGATCCAAATGGTGGTGATGGAGGACGCGTTTAAGGTGGCTTGTATGGAGGACCCACTGGCCAGAGAGATTGCCGGGATTGTTCAGAGTGAGGGATTCTGGAATGAACTGGAGGCGGTTTATTCGCTGGTGAAGCTCATCAGAGGAGTGGTTCAGGACATTGAGGCGGAGAGGCCGTTGGTTGGTCGGTGTTTGCCTCTCTGGGAGGAGGTTAGAACCAAGGTGAAGGAGTGGTGTGTTAAGTACAGTATTGTGGTTGAACCCGTAGAGGAAATACTTGAAAATCGATTCAGGAAGAATTATCACCCTGCATGGTCAGCTGCATTTATACTTGATCCTCTTTACTTGATTAAAGATGCGTGTGGAAAGTACCTTCCTCCGTTCAAGTGCTTAACTCGTGAACAAGAGAAAGATGTCGATAAGATATTGACGAGGCTGGCTTCACGAGAAGAAGCTCATGTGGTGTTGATGGAGCTCATGAAGTGGAGATCAGAAGGGCTTGACCCTCTTTATGCACAGGCTGTGCAGATGAAACAACAAGACCCCATTACAGGGAAGATGAAGGTAGCAAATCCACTTAGCAGTAGACTTGTTTGGGAAACTTGCCTCAGCGAATTTAAATCCCTACGGAAGCTTGCAGTGAGGCTCATTTTTCTGCATGCAACCTCATGTGGGTTTAAGAGTAATTATTCTTTCATCAGGAAGCTTTCTGCTCAGAAGCACTCGAGAATTTCCTTGGAAAGAGCTCAGAAAATGATATATATCGCAGCTCATGCCAAGCTTGAAAGACGAGATTTTTCCAATGAGGAAGAGAAAGAGGCAGAACTGCTTGCCATGGAAAGTAGTGATGATGGCATGCTGGCTGTCGTCTTTGCCGATACACCCCTAATAGGTGGCATTGCTTGA 2163 0.5012 MASTIAPSMPSTSTDPDPDAAVRAVRKRYEGLLTVRTRAIKGKGAWYWAHLEPTLLGNAVKLKCSLCDSLFSASNPSRTASEHLKRGTCPNFNHSSLPSPSPISTVLSHSNNGRKRTSSSASPNQDRSVQHLMLSGGKDDLCALAVFEDSVKKLKSPRNLSHVAPPELTQDQVNSAVELLADWFYESCGSVPLSSLEHPKFQSFLTQLGLPVTLLRREIYCSRLEDRFGAVKAESEARIRDALFFQVGCDGWKGEDGVAKFIVNLPNGTSVFHKVVLGGEVVSSKYAEEILWEVVKGVCGSDVQRCVGIVADRFKGKALRNLEVQNHWMVNVACQVQGFTGLIKDFSNNLPLFRVVTENSLKVANFINTESQVRGSFLRYRMQELECAGLVRVPSPKCNVFKDFTSVFPMLEDILRCAAVIQMVVMEDAFKVACMEDPLAREIAGIVQSEGFWNELEAVYSLVKLIRGVVQDIEAERPLVGRCLPLWEEVRTKVKEWCVKYSIVVEPVEEILENRFRKNYHPAWSAAFILDPLYLIKDACGKYLPPFKCLTREQEKDVDKILTRLASREEAHVVLMELMKWRSEGLDPLYAQAVQMKQQDPITGKMKVANPLSSRLVWETCLSEFKSLRKLAVRLIFLHATSCGFKSNYSFIRKLSAQKHSRISLERAQKMIYIAAHAKLERRDFSNEEEKEAELLAMESSDDGMLAVVFADTPLIGGIA* 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1711 720 PANTHER OSJNBA0013A04.12 PROTEIN 14 711 - -
Vra8g1711 720 SUPERFAMILY Ribonuclease H-like 279 681 IPR012337 -
Vra8g1711 720 PANTHER PUTATIVE ISOFORM 1-RELATED 14 711 - -
Vra8g1711 720 MobiDBLite consensus disorder prediction 91 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1711 Vra-Chr8 34258017 34262751 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1711 - - gmx:100790244 1267.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g1711 8 34258017 34262751 Vra1g0900 1 10459057 10464490 ECH
Vra8g1711 8 34258017 34262751 Vra8g1711 8 34258017 34262751 ECH
Vra1g0900 1 10459057 10464490 Vra8g1711 8 34258017 34262751 PCT