Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0900 ATGCCCCAAAACGACACCCATTCCCACCAAAACGGTGAAACCACCGTCACCACCCCACTACACCCTCCACTTCTGACGCTCCACCTTCAAGCCATGACCTCAACCACCTCAACCTCCACCGACCCCCTCCCATCAGACGACGGCGCGGCGGCCGTCAGGGCAGTCAACAAACGGTTCGAGGGGCTCCTCACTGTCCGGACCAAGGCCATCAAAGGCAAGGGAGCATGGTACTGGGCACACCTCGAGCCCATACTCGTTCCGCACCCTGACACCGGTCTCCCCAAATCAGTGAAACTCAAATGCTCCCTCTGCGACTCTCTCTTCTCCGCTTCAAACCCTTCAAGAACAGCTTCCGAACACTTAAAGCGTGGAACTTGCTCCAACTTCAGCTCCGGTTTGAGACCCGGTTCTGTCCCTTCTCCCCTCCCCATTTCCTCCATCACTCCCGGTTCGAACCGCAAAAGGGGTTCGCCTCAAATGGGTGCCACGTCACCCTCTTCTTATCAAAATCACTCCTTGGCCTTGGTCGAGTCTTCCCGCTTCGACATGGGGTACACCCCGATTCAGAACAGTAACAACAACAGCAATAGTAATAATAATAATAACAACAACATTATGCTCTTGCAGCATCACGGGCAGAGCCAACAGCATTTAATGTTGTCGGGTGGGAAGGATGATTTGTGTGCTTTGGCCATGTTTGAGGACAGTGTGAAGAAGTTGAAGAGTCCCAAGACTTCTCCTGGTCCTGCTTTGAGCAAGGACCAGGTGAATTCTGCTTTGGACTTGCTCTTCGATTGGTTCTATGAGACTTGTGGTTCTGTGTCCTTGTCTAGTCTGGAACATAGAAAGTTTCAGGCTTTCTTGGGCCAGGTTGGGTTGCCCGCCAATTTGAGGAGGGAGGTTTCTGGGGGGAGGCTTGATGCTAGGTTCGGGGAGGCCAAGGCTGAGTCCGAGGCTAGGATTAGGGACGCCATGTTTTTTCAGTTGGCGAGTGATGGGTGGAAGAGTGGGGGTTTGTTTAACTTTAACTCGTGTTGTGGTGGGGGGGAGAGTTTGGTGAAGTTTGTGGTGAATCTCCCCAATGGGAGTAGTGTGTTTCAGAAGGCTGTGTTCACTGGTGGAGTGGAGAATTCTAAGTATGCCGAGGAGGTTTTGTGGGAGACGGTTACTGCTGTTACTGGGAGTGTTGTCCACAGGTGTGTGGGGATTGTCGCAGATAAGTTCAAGGCGAAGGCGTTGAGGAACTTGGAGGCGCAGCACCATTGGATGGTGAACACTTCCTGCCAGCTTCAGGGGTTGGTTAGCTTGATCAAGGATTTTAACCGCGAGTTGCCGCTTTTCAGGTCTGTGATTGAGAATTGCTTGAAGGTTGCAAATTTTATGAACAGTGAGTCGCAGGTGAGGAGTCTTTTCCTCAAGTGCAGGGTGCAAGAGATGGACTGCGGCGGCCTAATTCGCGTGCCTTCACCCAAATGTGATCCGTTAAAGAATTTTCAACTGGTGTTTCCTATGTTGGAGGACATTTTGAGCTGTGCCAGAGTGATTCAGATGGTTGTGATGGAAGATGGGTTTAAGGTGATGTGCATGGAAGATACGCTAGTGAGGGAGGTTGCAGGGATGGTGCAGAATGAGGGGTTTTGGAACGAGTTGGAGGCGGTTTATTCACTTGTGAAGCTTGTTAGAGGGATGGTGCATGATGTTGAGGCTGAGAGACCATTGATGGGTAGGTGCTTGCCTCTTTGGGAGGAGCTGAGGAGCAAGGTGAAAGAGTGGTGTGGGAAGTTCAACATTGTGGAAGGACCTGTGGAGAAGATTGTTGAGAAGAGGTTTAGGAAGAATTATCATCCTGCTTGGGCAGCAGCGTTTATACTTGATCCACTTTACTTGATTAAGGATGCAAGTGGAAAGTATCTTCCTCCTTATAAGTGTTTGACGCGAGAACAGGAGAAGGATGTGGACAAGTTACTGACGAGGCTGGCTTCGCGAGAAGAGGCTCATGTTGTGTTGATGGAACTAATGAAATGGAGGTCAGATGGTCTTGATCCGCTTTATGCACAGGCTGTTCAGATGAAGCAGAGGGATCCGGTGACAGGGAAGATGAAAGTTGCAAATCCACTGAGTAGTAGACTTGTGTGGGAAACATGTTTGAGTGAGTTTAAATCCTTGGGGAAGATTGCAGTGAGGCTTATTTTTCAGCACGCAACTTCATGTGGGTTTAAGAGTAATTGGTCTTTTATGAGGAAATTTTCAGCTAATAAACAGTCAAGAGTTGCCTTGGAGAGGGCTCAGAAAATGATATACATTGCAGCTCATGCCAAGCTTGAAAGGAGAGACTTTTCCAGTGAGGAAGAGAAGGATGCAGAGCTGTTTGCCATGTCTGGTAGTGAGGATGGCATGCTGGCTGAAGTTTATGCTGATGCTCCCTTAGTAATTAACCGTTTAGGTTGCCATGATTGCTAA 2460 0.4943 MPQNDTHSHQNGETTVTTPLHPPLLTLHLQAMTSTTSTSTDPLPSDDGAAAVRAVNKRFEGLLTVRTKAIKGKGAWYWAHLEPILVPHPDTGLPKSVKLKCSLCDSLFSASNPSRTASEHLKRGTCSNFSSGLRPGSVPSPLPISSITPGSNRKRGSPQMGATSPSSYQNHSLALVESSRFDMGYTPIQNSNNNSNSNNNNNNNIMLLQHHGQSQQHLMLSGGKDDLCALAMFEDSVKKLKSPKTSPGPALSKDQVNSALDLLFDWFYETCGSVSLSSLEHRKFQAFLGQVGLPANLRREVSGGRLDARFGEAKAESEARIRDAMFFQLASDGWKSGGLFNFNSCCGGGESLVKFVVNLPNGSSVFQKAVFTGGVENSKYAEEVLWETVTAVTGSVVHRCVGIVADKFKAKALRNLEAQHHWMVNTSCQLQGLVSLIKDFNRELPLFRSVIENCLKVANFMNSESQVRSLFLKCRVQEMDCGGLIRVPSPKCDPLKNFQLVFPMLEDILSCARVIQMVVMEDGFKVMCMEDTLVREVAGMVQNEGFWNELEAVYSLVKLVRGMVHDVEAERPLMGRCLPLWEELRSKVKEWCGKFNIVEGPVEKIVEKRFRKNYHPAWAAAFILDPLYLIKDASGKYLPPYKCLTREQEKDVDKLLTRLASREEAHVVLMELMKWRSDGLDPLYAQAVQMKQRDPVTGKMKVANPLSSRLVWETCLSEFKSLGKIAVRLIFQHATSCGFKSNWSFMRKFSANKQSRVALERAQKMIYIAAHAKLERRDFSSEEEKDAELFAMSGSEDGMLAEVYADAPLVINRLGCHDC* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0900 819 SUPERFAMILY Ribonuclease H-like 395 775 IPR012337 -
Vra1g0900 819 MobiDBLite consensus disorder prediction 1 22 - -
Vra1g0900 819 PANTHER PUTATIVE ISOFORM 1-RELATED 44 806 - -
Vra1g0900 819 MobiDBLite consensus disorder prediction 112 169 - -
Vra1g0900 819 PANTHER OSJNBA0013A04.12 PROTEIN 44 806 - -
Vra1g0900 819 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0900 Vra-Chr1 10459057 10464490 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0900 - - gmx:100814598 1420.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g1711 8 34258017 34262751 Vra1g0900 1 10459057 10464490 ECH
Vra1g0900 1 10459057 10464490 Vra1g0900 1 10459057 10464490 ECH
Vra1g0900 1 10459057 10464490 Vra8g1711 8 34258017 34262751 PCT