Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1710 ATGGCTTGCTGGTCTGCAGAAAATGCCACAAAGGCCTATCTCAGCACTTTGAAAATGGGTCAAAAGTGCAAAGAGCCAGATGTGGCTGAGTTCATATCAGCACTTGCTGCAGGAAACAATGCACAACTGATGGTTGTGGCATGTGGTGGTGCAGCAGACTCCACCACACTTGCATTGGTTGCTGCTGCTCATCAAACTGGTGGCCAAGTGATTTGTATTGTCCCTGGGCATGAAGAGCTGAGAGCCTCAAAAGTTGCCTTGGGAGTGGCTTCTCATAAAGTTCAATTCATGGTAGGAGAAGCTCAGGAGCTTCTGTTAAAGCAATATGATGAGGTAGCAGATTTTGTTCTGATTGACTGCAACCTTGAGAAGCACGAAGAGATTTTGAAAGCAGTTGAAGAGGGTAGGAAGCAAAATGGCACAGTGGTTGTGGGGTACAATGCATTTAGCTGCAGAAAGTCTTGCTTGGCATGTGGATCAAAAACACAGCTTCTTCCCATAGGAGAAGGTTTGCTAGTGACTAGATTTGGAATGACTGAAACAAGTCCAAAGCATGGAAGCAGAATGGGAAAGTTCAAAAGCCGTTGGGTTGTCAAGGTAGATAAATGCACAGGCGAAGAACATGTGTTCAGAGTCAGATCTCCTCACAGGAAAGTCATCCAAGCTTAA 669 0.4544 MACWSAENATKAYLSTLKMGQKCKEPDVAEFISALAAGNNAQLMVVACGGAADSTTLALVAAAHQTGGQVICIVPGHEELRASKVALGVASHKVQFMVGEAQELLLKQYDEVADFVLIDCNLEKHEEILKAVEEGRKQNGTVVVGYNAFSCRKSCLACGSKTQLLPIGEGLLVTRFGMTETSPKHGSRMGKFKSRWVVKVDKCTGEEHVFRVRSPHRKVIQA* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1710 222 PANTHER BNAA09G06020D PROTEIN 1 222 - -
Vra8g1710 222 Gene3D Vaccinia Virus protein VP39 5 175 IPR029063 -
Vra8g1710 222 Pfam Protein of unknown function (DUF1442) 3 211 IPR009902 -
Vra8g1710 222 PANTHER DUF1442 FAMILY PROTEIN 1 222 IPR009902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1710 Vra-Chr8 34245055 34246199 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1710 - - gmx:100816283 408.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g1710 8 34245055 34246199 Vra8g1710 8 34245055 34246199 ECH
Vra1g0897 1 10427063 10428557 Vra8g1710 8 34245055 34246199 PCT