Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0897 ATGGCTTGCTGGTCTGCAGAAAATGCCACAAAGGCCTATCTCAACACACTGAAAATGGGTCAAAAGGCCAAAGAGCCAGCAGTTGCAGAGTTCATATCAGCACTAGCTGCTGGCAACAATGCACAACTGATGGTTGTGGCGTGTGCTGGTGCAGCAGACTCCACCACACTAGCATTAGTCAGTGCTGCACACCAAACCGGTGGCCATGTTGTTTGCATTGTCTCTGGCCATGATGAATTAAATGCCTCAAAAAAGGTTCTTGGAGTGAATGCTAGTGAAGTCCAGTTCATGGTTGGAGAGGTTCAACAGGAACTGCTGTTGTTGAGACAAGCAGATTTTGTGGTGATTGATTGCAACCATGTTAGCCATGGAGAGATTGTTAAAGCAATCCGAGATGGTGGGATGCAAAATGGTGCAGTGGTTGTTGGCTGCAATGCACTTAGCTGCAGAGGGTCATGGTGGTCTTGTGGATCAAAATCTCAGTTGCTGCCTATAGGAAAAGGGCTTCTGGTTACAAGATTTGGAGGAAGTGCTGCAAGCCCAAAACATGGATCTGGAGTGAGTAAGAGCAGAAGTAGTCGTTGGATTGTTAAGGTAGATAAATGCACTGGTGAAGAACATGTGTACAAGATCAGAGTTCCACAGGGGAAAGTGATTCAAGCTTAA 666 0.4625 MACWSAENATKAYLNTLKMGQKAKEPAVAEFISALAAGNNAQLMVVACAGAADSTTLALVSAAHQTGGHVVCIVSGHDELNASKKVLGVNASEVQFMVGEVQQELLLLRQADFVVIDCNHVSHGEIVKAIRDGGMQNGAVVVGCNALSCRGSWWSCGSKSQLLPIGKGLLVTRFGGSAASPKHGSGVSKSRSSRWIVKVDKCTGEEHVYKIRVPQGKVIQA* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0897 221 Pfam Protein of unknown function (DUF1442) 3 210 IPR009902 -
Vra1g0897 221 PANTHER DUF1442 FAMILY PROTEIN 1 221 IPR009902 -
Vra1g0897 221 Gene3D Vaccinia Virus protein VP39 5 173 IPR029063 -
Vra1g0897 221 PANTHER BNAA09G06020D PROTEIN 1 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0897 Vra-Chr1 10427063 10428557 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0897 - - gmx:100805528 383.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g0897 1 10427063 10428557 Vra1g0897 1 10427063 10428557 ECH
Vra1g0897 1 10427063 10428557 Vra8g1710 8 34245055 34246199 PCT