Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1705 ATGGCATCATCATTTGTGGGTACTTTATTTCCCAACAACTTCACACAAACCAAACACTCAGCTGTTCCTCTAAGAGGAGTTTCAACAAGGAGGAGACTGCACTTAACAACAGTAGCAGAGAGCATGACGACTGTCATAGAGAAACTGGGCATCAAGATTGAGAGAAACCCTCCTGAGTCCAAGCTCACTCAACTGGGTGTTAGGAAATGGCCCAAATGGGGATGCCCTCCAAGCAAATTCCCATGGACATATGAAGCCAAGGAGACTTGCTATCTTCTGGAAGGAAAAGTGAAGGTCTTTCCCAGTGGGTCAAATGAATCAGTTGAAATTGCTGCTGGTGACTTGGTTGTGTTTCCCAAAGGGATGAGTTGCACTTGGGATGTGTCTGTTGGTGTGGACAAGCACTATAAATTTGAATAA 420 0.4476 MASSFVGTLFPNNFTQTKHSAVPLRGVSTRRRLHLTTVAESMTTVIEKLGIKIERNPPESKLTQLGVRKWPKWGCPPSKFPWTYEAKETCYLLEGKVKVFPSGSNESVEIAAGDLVVFPKGMSCTWDVSVGVDKHYKFE* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1705 139 Gene3D Jelly Rolls 38 138 IPR014710 -
Vra8g1705 139 SUPERFAMILY RmlC-like cupins 59 136 IPR011051 -
Vra8g1705 139 PANTHER OS04G0445200 PROTEIN 29 139 - -
Vra8g1705 139 CDD cupin_TM1112-like 70 138 - -
Vra8g1705 139 Pfam EutQ-like cupin domain 63 136 IPR008579 -
Vra8g1705 139 PANTHER OS04G0445200 PROTEIN 29 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1705 Vra-Chr8 34212128 34213143 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1705 K06995 - gmx:100499968 258.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g1705 8 34212128 34213143 Vra8g1705 8 34212128 34213143 ECH
Vra1g0893 1 10378282 10379198 Vra8g1705 8 34212128 34213143 PCT