Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0893 ATGAATAACGTGATCGAGAAATTGGGCCTTAAGATTATAAGGAACGCTCCGGAAGAGATGCTCACTGAACTTGGTGTTAGGCAATGGACAATATGGAGTTGCCCTCCGAGTGAATTCCAATGGATATATGGATCTAAGGAGACATGCTATATCTTGGAAGGAAAAGTGAAGATTATTGTAAAAGATGAGTCAGTGGAAATTGTTGCTGGTGATTTAGTTGTGTTTCCAAAAGGGTTGAGTTGCACTTGGGATATATTAGTTGCTGTTGACAAACATTTTAGCTATGCATAA 291 0.3883 MNNVIEKLGLKIIRNAPEEMLTELGVRQWTIWSCPPSEFQWIYGSKETCYILEGKVKIIVKDESVEIVAGDLVVFPKGLSCTWDILVAVDKHFSYA* 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0893 96 Gene3D Jelly Rolls 1 95 IPR014710 -
Vra1g0893 96 CDD cupin_TM1112-like 29 93 - -
Vra1g0893 96 Pfam EutQ-like cupin domain 22 93 IPR008579 -
Vra1g0893 96 PANTHER OS04G0445200 PROTEIN 4 94 - -
Vra1g0893 96 PANTHER OS04G0445200 PROTEIN 4 94 - -
Vra1g0893 96 SUPERFAMILY RmlC-like cupins 19 93 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0893 Vra-Chr1 10378282 10379198 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0893 K06995 - gmx:100527470 143.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g0893 1 10378282 10379198 Vra8g1705 8 34212128 34213143 PCT