Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vra8g1614 | ATGGATTTGGTTTCGGAATCGGCCATCGTTGTAAGCCCCAGGTACAAGATGGAGACCCCCACCACCAATCCTACCGCTGGAACCTCCGCAGTCTCGTCTCCTTCTTCCGGAAGCAACAGTGGCAGCTCCACTCCCAGCCGTTACGAGAACCAAAAGCGCCGAGACTGGAACACTTTCTGCCAGTACCTAAGGAACCACCGTCCACCACTCTCGCTTGCCCTGTGCAGCGGCGCGCACGTGCTCGAATTCCTCCACTACCTCGACCAGTTCGGGAAGACCAAGGTTCACAACCACCCTTGCCCGTTCTTCGGCCTTCCCAACCCTCCTGCGCCGTGTCCCTGCCCTCTCCGCCAAGCGTGGGGCAGCCTCGATGCCCTCATCGGCCGCCTCCGCGCCGCCTACGAGGAAAACGGCGGCCGCCCGGAGTCCAACCCCTTCGGTGCACGCGCCGTCAGGAATTACCTGCGTGACGTTCGTGATTTTCAGGCGAAGGCGAGAGGTGTGAGCTACGAGAAGAAAAGGAAGAGGCCGAAGCCGAAGCTCACTCCCGCTCCTACTTAG | 561 | 0.6096 | MDLVSESAIVVSPRYKMETPTTNPTAGTSAVSSPSSGSNSGSSTPSRYENQKRRDWNTFCQYLRNHRPPLSLALCSGAHVLEFLHYLDQFGKTKVHNHPCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPESNPFGARAVRNYLRDVRDFQAKARGVSYEKKRKRPKPKLTPAPT* | 187 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vra8g1614 | 186 | MobiDBLite | consensus disorder prediction | 16 | 47 | - | - | |
| Vra8g1614 | 186 | Pfam | ALOG domain | 43 | 160 | IPR006936 | - | |
| Vra8g1614 | 186 | PANTHER | PROTEIN G1-LIKE5 | 14 | 180 | - | - | |
| Vra8g1614 | 186 | PANTHER | PROTEIN G1-LIKE2 | 14 | 180 | IPR040222 | - | |
| Vra8g1614 | 186 | MobiDBLite | consensus disorder prediction | 165 | 186 | - | - | |
| Vra8g1614 | 186 | ProSiteProfiles | ALOG domain profile. | 47 | 174 | IPR006936 | - | |
| Vra8g1614 | 186 | MobiDBLite | consensus disorder prediction | 1 | 50 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vra8g1614 | Vra-Chr8 | 33248862 | 33250386 | Transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vra8g1614 | - | - | gmx:102663941 | 275.018 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Vra3g0190 | 3 | 2204370 | 2206597 | Vra8g1614 | 8 | 33248862 | 33250386 | ECH | |
| Vra8g1740 | 8 | 34669715 | 34671785 | Vra8g1614 | 8 | 33248862 | 33250386 | ECH | |
| Vra8g1614 | 8 | 33248862 | 33250386 | Vra8g1614 | 8 | 33248862 | 33250386 | ECH | |
| Vra8g1614 | 8 | 33248862 | 33250386 | Vra8g1614 | 8 | 33248862 | 33250386 | PCT | |
| Vra8g1614 | 8 | 33248862 | 33250386 | Vra3g0190 | 3 | 2204370 | 2206597 | PCT |