Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vra3g0190 | ATGGATTCAAATATTCAAGACTTTATAGACACATGTAACTCCGACAACACCTGCAACCTCATCACCAATACCACCACCACCAACTTAACCACAAGTGCTACCTCTTCCTCCGCTGCTTCCACCTCCATCGCCAGCAGCAGCCGCTACGAGAACCAGAAACGCCGTGACTGGAACACCTTCGGTCAATACCTCAAGAATCACCGACCCCCTCTCTCCCTCTCAAGGTGTAGCGGTGCACACGTCCTTGAATTCCTAAGGTACCTGGATCAATTTGGGAAGACGAAAGTGCACACACCGATCTGCCCCTTTTACGGGCACCCGAACCCTCCAGCACCTTGTCCATGTCCTCTTAGGCAAGCTTGGGGGAGCCTTGACGCTCTGATTGGACGTTTGCGTGCAGCTTTTGAGGAAAATGGTGGAAAGCCCGAGGCAAACCCATTTGGAGCTCGAGCTGTGAGACTCTACCTTCGCGAGGTTCGTGATCTGCAATCCAAAGCAAGAGGAATTAGTTACGAGAAGAAGAAAAGGAAGCGTCCACCACCTCAGCAACAACCCATGCCACTGCCTCATCATTCTCTCCCTCCTCCAGGTGCAAGTGCAACTCATTAG | 609 | 0.5189 | MDSNIQDFIDTCNSDNTCNLITNTTTTNLTTSATSSSAASTSIASSSRYENQKRRDWNTFGQYLKNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKKRKRPPPQQQPMPLPHHSLPPPGASATH* | 203 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vra3g0190 | 202 | MobiDBLite | consensus disorder prediction | 166 | 202 | - | - | |
| Vra3g0190 | 202 | Pfam | ALOG domain | 42 | 161 | IPR006936 | - | |
| Vra3g0190 | 202 | PANTHER | PROTEIN G1-LIKE2 | 1 | 193 | IPR040222 | - | |
| Vra3g0190 | 202 | ProSiteProfiles | ALOG domain profile. | 48 | 175 | IPR006936 | - | |
| Vra3g0190 | 202 | PANTHER | G1-LIKE PROTEIN | 1 | 193 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vra3g0190 | Vra-Chr3 | 2204370 | 2206597 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vra3g0190 | - | - | gmx:100527164 | 324.709 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Vra3g0190 | 3 | 2204370 | 2206597 | Vra8g1614 | 8 | 33248862 | 33250386 | ECH | |
| Vra3g0190 | 3 | 2204370 | 2206597 | Vra3g0190 | 3 | 2204370 | 2206597 | ECH | |
| Vra8g1740 | 8 | 34669715 | 34671785 | Vra3g0190 | 3 | 2204370 | 2206597 | ECH | |
| Vra3g0190 | 3 | 2204370 | 2206597 | Vra8g0074 | 8 | 813820 | 815895 | PCT | |
| Vra8g1614 | 8 | 33248862 | 33250386 | Vra3g0190 | 3 | 2204370 | 2206597 | PCT |