Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1466 ATGGATGGTGATTCCTCTTGGAGTGCTCGTCTCTCTTCCGCCTCTAGGCGCTACCAATCGGCTCTCCAATCTCGATCAGACATGTTCATGGGTTTCGATGAAAATGACGGGGACGATGATATAAGGGAGGAGTTTCTCTGCCCATTTTGTTCCGAGTACTTTGATATTGTTGGATTATGCTGCCACATTGATGAAGAACATCCAATGGAAGCAAAAAATGGGGTATGTCCTGTTTGTGCATTGAGGGTGGGGGTTGATATGGTAGCACATATAACCCTACAACATGGGAGTATATTTAAGATGCAGCGAAAAAGGAAATCTCGGAAAGGTGGATCTTATTCAACACTATCATTATTGAGGAAGGAGCTACGAGAAGGAAATTTGCAGTCCCTTTTTGGTGGATCTTCATGTATAGTGTCCTCATCTAATGCAGCTGATCCACTGCTGTCATCATTTATACTGCCTTTAGCTAATGAACATACCAGCTCTCAGCCTCACTTGCACACTGAGGCAAGGTCATCTAAAAAAGGCTCAGATGCGAGTGTGTCAACAAGAAATGTGGAGACATCAACTTTGTCAGTTAAGGATAAGGAGGAGAAGGCAAAAAAATGCGAGTTTGTTCAAGGGCTGTTGCTGTCCACCATACTTGATGACAATTTATGA 663 0.4329 MDGDSSWSARLSSASRRYQSALQSRSDMFMGFDENDGDDDIREEFLCPFCSEYFDIVGLCCHIDEEHPMEAKNGVCPVCALRVGVDMVAHITLQHGSIFKMQRKRKSRKGGSYSTLSLLRKELREGNLQSLFGGSSCIVSSSNAADPLLSSFILPLANEHTSSQPHLHTEARSSKKGSDASVSTRNVETSTLSVKDKEEKAKKCEFVQGLLLSTILDDNL* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1466 220 MobiDBLite consensus disorder prediction 176 190 - -
Vra8g1466 220 PANTHER PROTEIN DEHYDRATION-INDUCED 19 HOMOLOG 4 1 218 - -
Vra8g1466 220 PANTHER PROTEIN DEHYDRATION-INDUCED 19 1 218 IPR033347 -
Vra8g1466 220 Pfam Drought induced 19 protein (Di19), zinc-binding 43 96 IPR008598 -
Vra8g1466 220 Pfam Stress-induced protein Di19, C-terminal 116 215 IPR027935 -
Vra8g1466 220 MobiDBLite consensus disorder prediction 163 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1466 Vra-Chr8 31577802 31580473 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1466 - - pvu:PHAVU_007G199600g 413.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0094 5 777228 781030 Vra8g1466 8 31577802 31580473 ECH
Vra8g1466 8 31577802 31580473 Vra8g1466 8 31577802 31580473 ECH