Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0094 ATGGACTCCTCAAATTCGTGGGTTTCCACGCGAATCTCCACCTCTTCACGCCGATATCAATCTCGATCTGATCTGTACATGGAGGAGAGTGAAGGGAACGATGATTTAAGAGCGGAGTACCTCTGCCCTTACTGCGCCGAGGATTACGACGTCGTTTCGCTCTGTTGCCACATTGACGAGCACCATCCCATACAAGCCAAAAACGGGGTGTGTCCTGTTTGTGGCAAAAAGGTAGGAATGGATATCGTTGGACATATTACCACGCAACATGGGAGCTTCTTGAGGGTGCAGCGTAAAAGGAGGGTTAGGAAAGGAGGCTCTTGCTCTACACTTTCTATGTTGAGGAGAGAGTTACGAGATGGAGCCTTGCAGTCACTTCTTGGAGGTTCTTCATTCCTAGCTTCCTCCAATTCTGACCCTGATCCTCTGTTATCATCTTTTATGTTCAGCCCACTTGGTTCCGATGAGTCTTTGAGTGCAACACTTCCTGCTTCCATCCAAGGTGCCCTTGTAAAAGAAAGCTCAAAAGATCATTTCTTGGAAAGAGAACCTAAACAGTTACAGCTGTCAGAAGAAGATAAAGTAGAGAACGCTCGGAGGTTTGAATTTGTGCAAGGGCTTCTGTTGTCCACCATTCTTGATGATAAATTATGA 654 0.4633 MDSSNSWVSTRISTSSRRYQSRSDLYMEESEGNDDLRAEYLCPYCAEDYDVVSLCCHIDEHHPIQAKNGVCPVCGKKVGMDIVGHITTQHGSFLRVQRKRRVRKGGSCSTLSMLRRELRDGALQSLLGGSSFLASSNSDPDPLLSSFMFSPLGSDESLSATLPASIQGALVKESSKDHFLEREPKQLQLSEEDKVENARRFEFVQGLLLSTILDDKL* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0094 217 PANTHER PROTEIN DEHYDRATION-INDUCED 19 HOMOLOG 4 1 215 - -
Vra5g0094 217 Pfam Drought induced 19 protein (Di19), zinc-binding 39 91 IPR008598 -
Vra5g0094 217 PANTHER PROTEIN DEHYDRATION-INDUCED 19 1 215 IPR033347 -
Vra5g0094 217 Pfam Stress-induced protein Di19, C-terminal 111 212 IPR027935 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0094 Vra-Chr5 777228 781030 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0094 - - gmx:100306669 335.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0094 5 777228 781030 Vra5g0094 5 777228 781030 ECH
Vra5g0094 5 777228 781030 Vra8g1466 8 31577802 31580473 ECH