Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1462 ATGCTTTTCCTTCTGTGTCTAGCTACATTCAAAACCTCCTCTTCCTTGCACTTGCATTGCCAGGGAATTTTTGAACTGATGAGGACAGGGTCTTGTATTTTTTTCTTATTGCAAGTACCCAGATGCAGCATACATAGCTTAGCCAAATGTAGAGAAGATGAAGCATTATGTGGTTTTATCAAGATTTATGGAAACAAATCTAGCATAAGACTACTTGGTTCTAGAATTGATGAGCCTGAGAGAGGATTTGCTACTAAGTTGATTAAAAGACTTGTAACTACAAGAGAAGGAAGTAAACAAAGCACTGGGAACACCAAATTAAGAAGTATCAAGCATGAAAGTTTTAGAGAGGAGATTTTACCAAGTGCTACAGTGAATGAAAACACGACACAGCTAGATCAGTTGCAGAAAATTCAGTGGCCTGAAGTGCAAGAAATTGCTCAATATAAAAATTTATCTGACCTACTCACTGTTTTTGTTTTTGATGTTGAGACTACTGGGTATAGCAGAGTAAATGATCGGATCATTGATATTGCACTTCGAGATCTCCAAGGTGGTGAGCACAGCACTTTCCAAACTCTTGTAAATCCTCAATGCCATGTTCCTAATTCACACGTTCATGGAATTGCTACCCATATGGTGAACCGAACTGATGTGCCAAGGATGGAAGACCTGGTACCCATCTTGTTGCAGTACATTAGAAGCCGTGAGAAACATGGTGGATATGTGTTATGGATTGCACATAATGCTCGCGCTTTTGATGCACCTTTTCTCATGCACGAGTTCATTCGATGTTCCATGGAGATTCCTCATAATTGGCTGTTTCTGGACACCCTTCCTCTGGCACGTCAACTGATAAAGACTGCTGGTTTTTTTCTCTGTATTTCTCATAGAATAGAACAGAAACACTTGATGCATAGGAATGAAAAGATCTTGACTTTGCATATGTTGGCATGTAGGAACAAACCTTTCTTCAGCTTCACTGGATCAGCCCACAGAGCCATGGTAGATGTGAACACATTGTCTCAGGTACTTCCCGTGTTGACATCTGATCTCAAGTTGACTTTATCCAGCCTTGTCAAAAAATCTTTCAATTTCTCAGATAAGGGCTAA 1113 0.3989 MLFLLCLATFKTSSSLHLHCQGIFELMRTGSCIFFLLQVPRCSIHSLAKCREDEALCGFIKIYGNKSSIRLLGSRIDEPERGFATKLIKRLVTTREGSKQSTGNTKLRSIKHESFREEILPSATVNENTTQLDQLQKIQWPEVQEIAQYKNLSDLLTVFVFDVETTGYSRVNDRIIDIALRDLQGGEHSTFQTLVNPQCHVPNSHVHGIATHMVNRTDVPRMEDLVPILLQYIRSREKHGGYVLWIAHNARAFDAPFLMHEFIRCSMEIPHNWLFLDTLPLARQLIKTAGFFLCISHRIEQKHLMHRNEKILTLHMLACRNKPFFSFTGSAHRAMVDVNTLSQVLPVLTSDLKLTLSSLVKKSFNFSDKG* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1462 370 SUPERFAMILY Ribonuclease H-like 154 355 IPR012337 -
Vra8g1462 370 Gene3D - 156 364 IPR036397 GO:0003676
Vra8g1462 370 Pfam Exonuclease 160 341 IPR013520 -
Vra8g1462 370 PANTHER POLYMERASE III POLC-TYPE, PUTATIVE ISOFORM 1-RELATED 29 368 - -
Vra8g1462 370 SMART exoiiiendus 157 354 IPR013520 -
Vra8g1462 370 PANTHER THREE PRIME REPAIR EXONUCLEASE 1, 2 29 368 IPR040393 GO:0008408
Vra8g1462 370 CDD DEDDh 160 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1462 Vra-Chr8 31549477 31552087 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1462 - - vra:106770524 737.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0902 3 9060300 9064131 Vra8g1462 8 31549477 31552087 PCT