Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0902 ATGAAGACGGGCTCCATGATTTTTTCATTATTAAATCTACCTAGATGTAGATTACAAAGATTAGCTAATTACTGGGGAGAAACCTTCCACAGTTTCAGTACGACTTGTGGAAACAAATCTAGCATCAGGCCGGTTGTTTATAGAATTCATGGTCTTCAGGGAGGTCAGAGAAAGAAGTGGACAAGACCAATATCCACAAATTCAGAAGGCAAGGGGAGCACCAAATCAAAAAGTATCAAGCATGAAATTTTGAGTGAAACCACTATAGCAGGTGCTACAATAGATGTAAATAAAACACAGCTTGATCAGTTCCAGGAAATTCAGTACCGTGACATAAAACAAGAGATTGCCCAGAATAAAGACTTGTCTAGTTTAGTTACTGTTATTGTTTTTGATATCGAAACCACAGGGCTCAGCAGAGAGAATGAAAGGATTATTGAAATTGCACTTCGAGATCTTCAGGGTGGTGAGAACAGCACTTTTCAGACTCTAGTCAACCCTCAACGCGAAGTTCCTAATTCACATATTCATGGCATTACTACTCATATGGTCAACAAACCTGAAGTTCCAAGGATGGAAGAGCTCATTCCTATCTTGTTGAAATATGTTCGAAGTCGTGAGAAACCTGGGGGATATGTGTTATTTGTTGCTCATAATGCTCGTTGTTTTGATGTCCCTTTCATCATCAACGAATTCCGACGTTGTTCTGCAAACATTCCTTGCAATTGGTTGTTCTCAGACACCCTGCCTTTAGGACGTGAACTAATAAAATCTGAAGGAACTAAACTTTCTTCATCTTCCCTTCCTGCCCTTCGTGACTACTACGGAATTAAAGGGGATGGACCAGCTCACAGGGCTATGGAAGATGTGAACGCATTGTGCTCGATTCTTTCCAAATTGACCCGTGATCTGAAATTGACCCTATCTTCTCTTGTCGAAGAAGCATTCAAAGAATCAGATATCATCAACTCCAAGAAGAAGAAAAAATCAGACTAG 996 0.4006 MKTGSMIFSLLNLPRCRLQRLANYWGETFHSFSTTCGNKSSIRPVVYRIHGLQGGQRKKWTRPISTNSEGKGSTKSKSIKHEILSETTIAGATIDVNKTQLDQFQEIQYRDIKQEIAQNKDLSSLVTVIVFDIETTGLSRENERIIEIALRDLQGGENSTFQTLVNPQREVPNSHIHGITTHMVNKPEVPRMEELIPILLKYVRSREKPGGYVLFVAHNARCFDVPFIINEFRRCSANIPCNWLFSDTLPLGRELIKSEGTKLSSSSLPALRDYYGIKGDGPAHRAMEDVNALCSILSKLTRDLKLTLSSLVEEAFKESDIINSKKKKKSD* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0902 331 PANTHER THREE PRIME REPAIR EXONUCLEASE 1, 2 3 329 IPR040393 GO:0008408
Vra3g0902 331 PANTHER POLYMERASE III POLC-TYPE, PUTATIVE ISOFORM 1-RELATED 3 329 - -
Vra3g0902 331 Pfam Exonuclease 129 296 IPR013520 -
Vra3g0902 331 SMART exoiiiendus 127 306 IPR013520 -
Vra3g0902 331 MobiDBLite consensus disorder prediction 57 77 - -
Vra3g0902 331 MobiDBLite consensus disorder prediction 59 73 - -
Vra3g0902 331 CDD DEDDh 129 297 - -
Vra3g0902 331 Gene3D - 126 316 IPR036397 GO:0003676
Vra3g0902 331 SUPERFAMILY Ribonuclease H-like 125 307 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0902 Vra-Chr3 9060300 9064131 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0902 - - gmx:100807346 510.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0902 3 9060300 9064131 Vra8g1462 8 31549477 31552087 PCT