Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1449 ATGGCACAAGAACAACGGCGGATCCTGGTGGCCGTGGATGAAGGCGAGGAGAGCTTGCACGCCCTCTCATGGTGCCTCAAAAACCTTGTTTTACAAAATTCCAAGGACACCCTTATTCTTCTGTACGTGAAACCCCCTCGCGTCGTTTATTCTACCTTTGATGGGACAGGATATCTGTTTTCCTCCGACGTAACGGCAGCCATGGAGAGGTACGGGCAGGAGGTGGCGGATGTGGTGTTGGAAAAAGCGATGAAACTGTGTAACAATATTGAAAAAGTGGAGACGAGAGTAGAGAATGGCGATCCGAGGGACGTGATTTGTGAAATGGTTCAAAAGTTGGGTGCTGATGTGTTGGTGATGGGAAGCCATGGCTATGGTCTGATCAAGAGGGCTTTCCTTGGAAGTGTTAGTAATCACTGTGCACAGAACGCCAAGTGCCCAGTTTTGATTGTCAAAAAGCCAAAACCAGCTATCGGAAACCAATAA 486 0.4835 MAQEQRRILVAVDEGEESLHALSWCLKNLVLQNSKDTLILLYVKPPRVVYSTFDGTGYLFSSDVTAAMERYGQEVADVVLEKAMKLCNNIEKVETRVENGDPRDVICEMVQKLGADVLVMGSHGYGLIKRAFLGSVSNHCAQNAKCPVLIVKKPKPAIGNQ* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1449 161 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 3 156 - -
Vra8g1449 161 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 6 154 - -
Vra8g1449 161 Gene3D HUPs 1 158 IPR014729 -
Vra8g1449 161 Pfam Universal stress protein family 6 152 IPR006016 -
Vra8g1449 161 PRINTS Universal stress protein signature 5 23 IPR006015 -
Vra8g1449 161 PRINTS Universal stress protein signature 112 124 IPR006015 -
Vra8g1449 161 PRINTS Universal stress protein signature 130 152 IPR006015 -
Vra8g1449 161 CDD USP_Like 7 151 - -
Vra8g1449 161 PANTHER OS05G0357525 PROTEIN 3 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1449 Vra-Chr8 31434083 31435029 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1449 - - gmx:100305594 285.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g1449 8 31434083 31435029 Vra8g1449 8 31434083 31435029 ECH
Vra3g0890 3 8969768 8971142 Vra8g1449 8 31434083 31435029 PCT