Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1429 ATGGGAGACAAAGAGGTAAAGGGTGGATTCAGGGCTTCCATGTTTATCTTTGTGTTGGTAGCATTGGACAACATGGGTTTTGTAGCAAACATGGCGAGCTTGGTTCTATACTTTTATGGGGTGATGCACTTTGATCTCTCCAACTCTGCCAACACCCTGACAACCTTTTTGGGCTCAACTTTCTTGCTCTCTCTAGTTGGTGGTTTCATCTCGGACACATACTTCAACAGACTAACCACATGTTTGTTTTTCGGATCACTCGAAGTTTTGGCTTTGGTAATGCTCACAGTTCAAGCTGGTCTGGACCATTTACACCCAGATTCTTGTGGCAAGTCGAGCTGTGTCAAAGGTGGCATAGCTGTCATGTTTTACACGTCATTGTATTTATTGGCTTTGGGCATGGGAGGAGTGAGAGGTTCCTTGACTGCATTTGGTGCTGACCAATTTGATGAAAAGAGTCCAAGAGAAGCAAAGGCTCTTGCAAGCTTCTTCAATTGGCTTTTGCTCAGTTCAACCTTGGGATCAATTATAGGGGTCACTGGGGTTGTTTGGGTTAGCACCCAAAAGGCTTGGCACTGGGGCTTTACCATAGCAACACTTGCTTCCTCCATTGGCTTTCTCGCTCTTGCTCTTGGCAAGCCATTCTACCGCGTCAAAACTCCTGGTCAAAGCCCCATTTTGAGGATTACTCAAGTTATTTTCGTGGCTTTCAAAAACCGGAAGCTACCACTGCCAGAGTCACATGAAGAACTTTATGAGGTCTATGAAAGTGCTAAATTAGAAAGGATTGCACATACCAACCAAATGAGGTTTCTAGATAGGGCAAGCATTCTTGAACAAAACATTGAGCCACAAGCATGGAAGGTGTGTTCAGTGACGCAAGTAGAAGAAGTAAAGATCCTGACAAGAATGTTACCAATATTAGCAAGCACCATTATAATGAACACTTGTTTAGCACAGCTTCAAACATTCTCAGTTCAGCAGGGGAATATGATGAATCTGAAACTTGGTTCTTTTACTGTGCCAGCTCCATCAATTCCAGTGATCCCCCTGCTTTTCATGTGCATCCTAATTCCCATGTATGAATTCTTGTTTGTGCCATTCGCACGAAAGATCACTCAGCACCCTTCTGGGGTTACTCCACTTCAAAGAGTTGGTGTTGGGTTAGTACTTTCTTTCATTTCAATGGCAGTAGCTGGTATAGTAGAAGTGAAAAGAAGGGATCAAGGAATAAAGGATCCTTCAAGGCCAATAAGTCTGTTTTGGTTATCTTTCCAATATGCTATATTTGGAATTGCAGACATGTTCACTCTTGTAGGACTCCTAGAATTCTTCTACAGGGAAGCACCTGAAACAATGAAATCACTGTCAACTTCTTTCACATATTTGTCTATGTCTCTTGGTTACTTCTTAAGCACAGTCTTTGTGGATGTCATCAATGCTGTAACCAAAAGGGTCACCCCAAGCAAGCAAGGATGGTTGCATGGCTTAGACTTGAATCAAAACAACCTTAACTTGTTCTATTGGTTTTTAGCAATCCTAAGCTGTCTAAATTTTTTTAACTACCTTTACTGGGCCTCTTGGTACAAGTACAAAGCTGATGAAGACAGCAATTCAATGGTGAATTTGAATACTTTCAAAAGTGTTGATGAGGAAGAAAAGAAGAACGGAAAAGTTAAGGCTAAAGAAAGCAGCCAAACAAGTGAAGCCAACACTGAGGGACCCTCCTCCTCTGATGAAACAGACGATGGAAGGAACTCTAGAGAATGGAAACACAGATAA 1782 0.4214 MGDKEVKGGFRASMFIFVLVALDNMGFVANMASLVLYFYGVMHFDLSNSANTLTTFLGSTFLLSLVGGFISDTYFNRLTTCLFFGSLEVLALVMLTVQAGLDHLHPDSCGKSSCVKGGIAVMFYTSLYLLALGMGGVRGSLTAFGADQFDEKSPREAKALASFFNWLLLSSTLGSIIGVTGVVWVSTQKAWHWGFTIATLASSIGFLALALGKPFYRVKTPGQSPILRITQVIFVAFKNRKLPLPESHEELYEVYESAKLERIAHTNQMRFLDRASILEQNIEPQAWKVCSVTQVEEVKILTRMLPILASTIIMNTCLAQLQTFSVQQGNMMNLKLGSFTVPAPSIPVIPLLFMCILIPMYEFLFVPFARKITQHPSGVTPLQRVGVGLVLSFISMAVAGIVEVKRRDQGIKDPSRPISLFWLSFQYAIFGIADMFTLVGLLEFFYREAPETMKSLSTSFTYLSMSLGYFLSTVFVDVINAVTKRVTPSKQGWLHGLDLNQNNLNLFYWFLAILSCLNFFNYLYWASWYKYKADEDSNSMVNLNTFKSVDEEEKKNGKVKAKESSQTSEANTEGPSSSDETDDGRNSREWKHR* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1429 593 MobiDBLite consensus disorder prediction 551 593 - -
Vra8g1429 593 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 6 542 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vra8g1429 593 SUPERFAMILY MFS general substrate transporter 13 217 IPR036259 -
Vra8g1429 593 Gene3D MFS general substrate transporter like domains 2 538 IPR036259 -
Vra8g1429 593 MobiDBLite consensus disorder prediction 578 593 - -
Vra8g1429 593 SUPERFAMILY MFS general substrate transporter 122 535 IPR036259 -
Vra8g1429 593 Pfam POT family 80 493 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vra8g1429 593 MobiDBLite consensus disorder prediction 563 577 - -
Vra8g1429 593 PANTHER PEPTIDE/NITRATE TRANSPORTER 6 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1429 Vra-Chr8 31240805 31244093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1429 8 541 Organic Solute Cotransporters AT1G59740 41.941 3.62e-147 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1429 K14638 - gmx:100812867 1048.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0851 3 8643664 8647663 Vra8g1429 8 31240805 31244093 PCT