Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0851 ATGGCTGACCATGATGCCAAAGAAGAACAAAGGCCCCTCAACCAATGGAAGAGAAGCAAAGGGGGATTCGTGGCTTCCATGTTCATTTTTGTCTTGTCAGCATTGGACAACATGGGTTTTGTGGCAAACATGGTGAGCATAGTCCTATACTTTTATGGAGTGATGCACTTTGATCTGGCCAGCTCAGCCAACACCCTCACAAACTTTATGGGTTCAACCTACTTGCTTTCCCTCGTTGGAGGCTTCATCTCAGATACTTACTTGAACAGATTCACCACATGCTTGCTTTTCGGATCACTGGAGGTTCTGGCTTTGGCAATGCTCACAGTTCAGGCTGCTTCAAGTCATTTACACCCTGAAGCTTGTGGCAAATCAAGCTGCGTCAAGGGTGGCATAGCAGGGATGTTTTACACATCACTGTGCTTGTTGGCATTGGGAATGGGAGGGGTGAGAGGATCCATGACTGCATTTGGTGCTGACCAATTTGATGAGAAGGATCCAACTGAGGCAAAAGCCCTTGCCAGTTTTTTCAATTGGCTTTTGCTGAGTTCAACAGTGGGAGCAATAACAGGAGTCACTGGTGTTGTGTGGGTTAGCACCCAAAAATCATGGCATTGGGGTTTTTTCATAATAACCATTGCTTCCTCTGTTGGGTTTGTGACCCTTGCCCTTGGTAAGCCATTCTACCGCATCAAAACTCCAGGAGACAGCCCCACTTTGAGAATTGCTCAGGTTATTGTTGTGGCTTTTAAGAACCGAAAGTTGTCACTGCCGGAGTCACATGGAGAACTATATGAAATCAGTGATAAAGATGCTACAACGGAAAAGATTACCCACACCAACCAAATGAGGTTTCTAGACAAAGCGGCAATTATCCAAGAAAACTCAAAACCCGAAGCATGGAAAGTGTGCACAGTGACACAAGTTGAAGAGGTGAAGATCCTAACAAGAATGTTACCGATAGTAGCCAGTACCATTATACTGAACACTTGTATGGCACAGCTTCAAACATTCTCAGTTCAACAAGGGAACATAATGAACCTGAAACTTGGGTCCCTGACAGTGCCTGCACCATCCATTCCTGTTATCCCCCTTGTCTTCATAAGTGTCCTAGTTCCCTTGTATGAGTTATTTTTTGTGCCAATTGCAAGAAAAATCACTCACCACCCTTCAGGCATAACACAGCTCCAAAGGGTAGGGGTGGGGTTGGTACTCTCAGCAATATCAATGGCAGTGGCTGGGATTGTGGAAGTGAAAAGAAGGGACCAAGGAAGGAAAGACCCTTCTAGGCCTATAAGCCTATTTTGGCTTTCATTTCAGTATGGTATATTTGGCATTGCGGATATGTTCACCCTTGTGGGATTATTGGAATTCTTTTACAGGGAATCACCTGCTAACATGAAATCACTTTCAACCTCTTTCACGTGGTTGTCTACAGCCCTTGGTTACTTCTTGAGCACAGTCTTTGTCAATGTCATCAATGCTGTCACCAAAAGGATCACTCCAAGCAAACAAGGCTGGTTGCATGGCTTCGACTTGAACCAAAACAACCTTAACTTGTTCTATTGGTTCCTAGCCACCCTCAGTTGCCTTAACTTTTTTAACTATCTCTATTGGGCCTCAAAGTACAAGTACAAATGTGAAGACTCCGGTCCAGGTTTTAAGGCTTTGGCTGAAATGCCTCTCAAAAGGGTTGAGAGAAAAGAAGATTACGGCAGTGATAGAGAATAA 1731 0.4443 MADHDAKEEQRPLNQWKRSKGGFVASMFIFVLSALDNMGFVANMVSIVLYFYGVMHFDLASSANTLTNFMGSTYLLSLVGGFISDTYLNRFTTCLLFGSLEVLALAMLTVQAASSHLHPEACGKSSCVKGGIAGMFYTSLCLLALGMGGVRGSMTAFGADQFDEKDPTEAKALASFFNWLLLSSTVGAITGVTGVVWVSTQKSWHWGFFIITIASSVGFVTLALGKPFYRIKTPGDSPTLRIAQVIVVAFKNRKLSLPESHGELYEISDKDATTEKITHTNQMRFLDKAAIIQENSKPEAWKVCTVTQVEEVKILTRMLPIVASTIILNTCMAQLQTFSVQQGNIMNLKLGSLTVPAPSIPVIPLVFISVLVPLYELFFVPIARKITHHPSGITQLQRVGVGLVLSAISMAVAGIVEVKRRDQGRKDPSRPISLFWLSFQYGIFGIADMFTLVGLLEFFYRESPANMKSLSTSFTWLSTALGYFLSTVFVNVINAVTKRITPSKQGWLHGFDLNQNNLNLFYWFLATLSCLNFFNYLYWASKYKYKCEDSGPGFKALAEMPLKRVERKEDYGSDRE* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0851 576 PANTHER PEPTIDE/NITRATE TRANSPORTER 10 557 - -
Vra3g0851 576 Gene3D MFS general substrate transporter like domains 2 550 IPR036259 -
Vra3g0851 576 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 10 557 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vra3g0851 576 Pfam POT family 91 506 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vra3g0851 576 SUPERFAMILY MFS general substrate transporter 6 544 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0851 Vra-Chr3 8643664 8647663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0851 17 550 Organic Solute Cotransporters AT1G69850 41.623 8.76e-146 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0851 K14638 - gmx:100781861 1080.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0851 3 8643664 8647663 Vra8g1429 8 31240805 31244093 PCT