Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1416 ATGGCTTCCACCGAACACCAAAACGGCGACGCGGTTTCCCATCCCCACAAGAAGTTAAAGCCCACCAATTTCATCACCGACGCCGAGATCCAATCTGAATTCTCCCACCACGACCCCGCCGTGGCGCGCCTCAACAACGGCGCCTTCGGCTGCTGCCCGGCCTCCGTCCTCGCCGTGCAGCGCGACTGGCAGCTCAAGAACCTCCGCCAGCCGGACCAATTCTACTTCAACCACCTCAAGAGCGGCCTCCTCCGCTCCCGCACCATCATCAAGGACCTGGTCAACGCCCGTCACGTGGACGAGATCTCCCTCGTCGACAACGCCTCCACCGCCACCGCCATCGTCCTCCAGCAGGCCGCCTGGGCCTTCCACGACGGAACCTTCCAGAAGGGCGACGTCGTCCTCATGCTGCACTACGCCTACGGAGCCGTAAAGAAAGCCATCGAGGCCTACGTGGTACGTGCCGGCGGCTCCGTCGTCGTGGTCCCCCTCCGCTTCCCGGTAACCTCCAACGACGAAATCGTCCGGGAGTTTCGCAAGGCCATCGAGAAAGGAAAGTCCCGAGGTAACAGAATCCGCTTGGCGGTTATCGACCACGTGACTTCCATGCCCAGCGTGGTCATTCCCGTTAAGGAGTTAGTTACGCTCTGCAGGGAGGAGGGGGTGGAGCAGGTTTTCGTTGACGCGGCGCACGCGATTGGGTGCACGCGCGTGGATATGCAAGAGATTGGCGCGGATTTCTACACGAGCAATTTGCATAAGTGGTTCTTCTGCCCCCCTTCCGTGGCGTTCCTCTACGCACGTGCGTCGCCGAAGTCACGTGACCTACACCATCCCGTTGTGTCTCACGAGTACGGGAATGGGTTAGCGGTGGAGAGTTCTTGGACCGGGAACCGGGACTACAGTGCACAGTTGGTGGTTCCTGCGGTTATGGATTTCGTGAAGAGGTTCGAAGGAGGAATCGAAGGGATCAGAAAAAGGAATCATGATGTTGTGGTTGAGATGGGGAAGATGTTGGTGGAGGCTTGGGGAACCCATCTCGGAACTCCTCCTGACATGAGTGCTAGCATGGTGATGGTAGGTTTGCCTCCATGTTTGGGGATTATGAGTGATTCTCATGCTCTCAAACTTAGGACTCGTTTGAGAGATGAGTTTGGAGTTGAAGTTCCCATTTATTTCGCTGGAGGAGAAGAAGACGCCACTGTTACTGCCTATGCCCGAATTTCTCGCCAGGTTTACAACAAACTTGAGGACTATGTTAAGTTTAAGGATGCAATTAATCAACTTGTCACCGATGGCTTCACCTGTGCTCTTCTTTCCGATTGA 1326 0.5626 MASTEHQNGDAVSHPHKKLKPTNFITDAEIQSEFSHHDPAVARLNNGAFGCCPASVLAVQRDWQLKNLRQPDQFYFNHLKSGLLRSRTIIKDLVNARHVDEISLVDNASTATAIVLQQAAWAFHDGTFQKGDVVLMLHYAYGAVKKAIEAYVVRAGGSVVVVPLRFPVTSNDEIVREFRKAIEKGKSRGNRIRLAVIDHVTSMPSVVIPVKELVTLCREEGVEQVFVDAAHAIGCTRVDMQEIGADFYTSNLHKWFFCPPSVAFLYARASPKSRDLHHPVVSHEYGNGLAVESSWTGNRDYSAQLVVPAVMDFVKRFEGGIEGIRKRNHDVVVEMGKMLVEAWGTHLGTPPDMSASMVMVGLPPCLGIMSDSHALKLRTRLRDEFGVEVPIYFAGGEEDATVTAYARISRQVYNKLEDYVKFKDAINQLVTDGFTCALLSD* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1416 441 Gene3D - 69 322 IPR015421 GO:0003824
Vra8g1416 441 PANTHER ISOPENICILLIN N EPIMERASE-LIKE PROTEIN 8 440 - -
Vra8g1416 441 SUPERFAMILY PLP-dependent transferases 35 430 IPR015424 -
Vra8g1416 441 PANTHER L-CYSTEINE DESULFHYDRASE 8 440 - -
Vra8g1416 441 Pfam Aminotransferase class-V 85 271 IPR000192 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1416 Vra-Chr8 31034988 31037005 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1416 K22207 - gmx:100796732 739.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0859 3 8714122 8716619 Vra8g1416 8 31034988 31037005 PCT