Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0859 ATGTCTTCCGCCACCGATAACCATATCCACGAAAACAACCACCACAACGGTTCTTGCATACCCAAAAAGCCCAAACTCTCCTCCTCCCTTATAACGGCCTCGGAAATCGAAACCGAATTTGGCCACCACGACACCTCCGTTGCGCGCATCAATAACGGCAGCTTCGGTTGCTGCCCCGCCTCCATCATCGCCGCGCAGCACCGCTGGCAGCTCCGGTACCTCCGCCAGCCCGACCACTTCTACTTCAATGACCTCAAAACGGGCATCCTCCAATCGCGAACCCTAATCAAGGACCTTGTCAACGCTGACCACGTCGATGAGATCTCCATTGTCGACAACGCCACCACCGCTGCCGCCATCGTCCTCCAGCACACCGCATGGAACTTCCGCGAAGGAAGATTCCAGAAAGGTGATGTCGTCCTCATGCTTCACTACGCTTACGGTGCCGTCAAGAAATCCATGGAAGCGTACGTCACTCGCGCCGGAGGCAATGTTGTCGAGGTTCCCCTCCCTTTCCCTGTTAACTCCAACGACGAGATCGTTTCAGAGTTTAGGAAGGCCTTGGAGAGAGGAAAAAGTAACGGAAATAGGGTTAGATTAGCGGTGATTGATCACGTGACTTCCATGCCGTGTGTGGTTATTCCTGTCAAGGAGTTGATTCAAATTTGCAGGGAGGAGGGGGTGGACCAGGTTTTTGTTGACGCTGCTCATTCCATTGGATGCACTGATGTTGACATGAAGGAAATTGGTGCTGATTTTTACACTAGCAATTTGCATAAGTGGTTCTTTTGTCCACCTTCAATTGCGTTTTTGTATACTCGTAGGAACTCCAAGGGTTCTGTTTCTGATTTACATCACCCCGTGGTGTCTCATGAGTATGGCAATGGCCTGGCTGTGGAGAGTGCTTGGATTGGGACCAGGGATTATAGTGCACAGTTGGTTGTTCCTGCAGCGATGGAGTTTGTTAACCGGTTTGAAGGGGGTATTGAGGGGATCAAGAAGAGGAATCACGAGGCTGTTGTGGAGATGGGGGAGATGTTGGCAAAGGCATGGGGTACTCGGCTGGGGAGTCCGGCGCATATGTGTGCTAGCATGGTTATGGTTGGTTTGCCCGTTTGTCTGGGGATTGGAAGTGATTCTGATGCTCTAGAGTTGAGAACACATTTGAGGGATGCTTTTGGAGTTGAGGTTCCGCTATATTATCGGCCCCCAAGAGAGGGGGAAGTTGGGGTGATTACTGGGTATGCCAGAATTTCTCATCAAGTGTATAACAAAGTTGATGACTATTACAAGTTCAGAGATGCGGTTAACCAACTTGTGCAAATTGGGTTCACGTGTGCTGATCTTTCGGGTTGA 1356 0.5059 MSSATDNHIHENNHHNGSCIPKKPKLSSSLITASEIETEFGHHDTSVARINNGSFGCCPASIIAAQHRWQLRYLRQPDHFYFNDLKTGILQSRTLIKDLVNADHVDEISIVDNATTAAAIVLQHTAWNFREGRFQKGDVVLMLHYAYGAVKKSMEAYVTRAGGNVVEVPLPFPVNSNDEIVSEFRKALERGKSNGNRVRLAVIDHVTSMPCVVIPVKELIQICREEGVDQVFVDAAHSIGCTDVDMKEIGADFYTSNLHKWFFCPPSIAFLYTRRNSKGSVSDLHHPVVSHEYGNGLAVESAWIGTRDYSAQLVVPAAMEFVNRFEGGIEGIKKRNHEAVVEMGEMLAKAWGTRLGSPAHMCASMVMVGLPVCLGIGSDSDALELRTHLRDAFGVEVPLYYRPPREGEVGVITGYARISHQVYNKVDDYYKFRDAVNQLVQIGFTCADLSG* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0859 451 PANTHER ISOPENICILLIN N EPIMERASE-LIKE PROTEIN 22 450 - -
Vra3g0859 451 Gene3D - 60 324 IPR015421 GO:0003824
Vra3g0859 451 PANTHER L-CYSTEINE DESULFHYDRASE 22 450 - -
Vra3g0859 451 MobiDBLite consensus disorder prediction 1 21 - -
Vra3g0859 451 SUPERFAMILY PLP-dependent transferases 44 440 IPR015424 -
Vra3g0859 451 Pfam Aminotransferase class-V 84 367 IPR000192 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0859 Vra-Chr3 8714122 8716619 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0859 K22207 - gmx:100786129 850.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0859 3 8714122 8716619 Vra3g0859 3 8714122 8716619 ECH
Vra3g0859 3 8714122 8716619 Vra8g1416 8 31034988 31037005 PCT