Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1393 ATGAGTCAAGTTTCTGCAGAGATTAAGGCCAAATCTGAGGTGTATCATGGAGATGAACTGTGCCAAGAAAAGACCAAGTTGCTGCTGAAGGAGGTAGGGCTACCCAATGGGCTTTTGCCCTTGAAAGACATTGAAGAGTGTGGGTACGAGAAGGAAAGTGGGTTTGTGTGGCTGAAGCAGAAGAAGAGCATAAACCACAAGTTTGAGAAGATTGGGAAGCTAGTGTCCTATGCAACTGAGATCACAGCCTATGTTGAGGTTGGTAAGATAAAGAAGCTCACTGGTGTGAAGGCCAAGGAACTCTTGGTTTGGGTGACACTTTGTGAGATCTTTGTTGATGATCCACCCACTGGGAAGATCACCTTCAAGACCCCTTCATCGTTGTTCAGGACATTCCCTGTCTCAGCTTTTGTGATTGAGGAACCAGTTAAGGAACTCAAGAATAAAGAAGAAAACGAAGAAAAAGAAGAAGAGAAGCAAGTCAAACAAGTTGCTAATGCTGCTGTTGAAGTTCAAGAAGTTTGA 525 0.4381 MSQVSAEIKAKSEVYHGDELCQEKTKLLLKEVGLPNGLLPLKDIEECGYEKESGFVWLKQKKSINHKFEKIGKLVSYATEITAYVEVGKIKKLTGVKAKELLVWVTLCEIFVDDPPTGKITFKTPSSLFRTFPVSAFVIEEPVKELKNKEENEEKEEEKQVKQVANAAVEVQEV* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1393 174 Pfam Protein of unknown function, DUF538 28 137 IPR007493 -
Vra8g1393 174 PANTHER T31J12.3 PROTEIN-RELATED 2 161 IPR007493 -
Vra8g1393 174 SUPERFAMILY At5g01610-like 4 141 IPR036758 -
Vra8g1393 174 Gene3D - 4 148 IPR036758 -
Vra8g1393 174 Coils Coil 143 168 - -
Vra8g1393 174 PANTHER PLANT/F25P12-18 PROTEIN 2 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1393 Vra-Chr8 30825744 30826570 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1393 - - gmx:100500427 257.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0879 3 8878694 8879476 Vra8g1393 8 30825744 30826570 PCT