Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0879 ATGGCTCTGGTAGCAGAGGATGTCAAGAGCAGATCGGAGGTGTACCACGGCGACGAAATCTGCCAGGTGAAGTCCAAAGAGCTACTCAAGGAAATCGCTCTCCCCAATGGTCTCTTGCCCCTCAAAGACATAGAAGAGTGCGGTTACGACCGAGAAACCGGTTTCGTCTGGCTCAAACAGAAGAAGAGTTACACTCACAAGTTCGAAAAAATCGGTAAACTTGTGTCCTACGCGCCGGAGGTCACTGCTCATGTAGAAAAGGGAAAGATCTCCAAGCTCACCGGTGTGAAGACGAAGGAGCTCTTGCTCTGGATCACGCTCAGTGACATCTACGTCGATGACCCTCCCACCGGCAAAATCACCTTCAAAACCCCCGCTGGGCTATTTCGGTCTTTTCCTGTCTCCGCCTTCGAGATTGAGGAGCAGGCTCAGGCGAGTAAGCGCGTGGAGGAGCCAGCTGCGGCTGTGCAAGTGAAAGAGGTCTGA 486 0.5309 MALVAEDVKSRSEVYHGDEICQVKSKELLKEIALPNGLLPLKDIEECGYDRETGFVWLKQKKSYTHKFEKIGKLVSYAPEVTAHVEKGKISKLTGVKTKELLLWITLSDIYVDDPPTGKITFKTPAGLFRSFPVSAFEIEEQAQASKRVEEPAAAVQVKEV* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0879 161 SUPERFAMILY At5g01610-like 5 142 IPR036758 -
Vra3g0879 161 Pfam Protein of unknown function, DUF538 26 138 IPR007493 -
Vra3g0879 161 PANTHER PLANT/F25P12-18 PROTEIN 2 149 - -
Vra3g0879 161 Gene3D - 7 149 IPR036758 -
Vra3g0879 161 PANTHER T31J12.3 PROTEIN-RELATED 2 149 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0879 Vra-Chr3 8878694 8879476 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0879 - - vra:106757663 321.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0879 3 8878694 8879476 Vra8g1393 8 30825744 30826570 PCT