Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vra8g1305 | ATGCAACTCGATTTGATCCTTGTCTCTCCTCCGAAACGCAAGAAGAAGACGTGCTTCAATCAAGGAGGAGAGACAATGGATCATTTCAGATTCAACAAAACCCTTCTCCTCATCGGAGCACTCTCTTGCCTCCTCCTATCCACCGTCGCCTCCGCCCGTCAACTTCTAGCCGCACCTGTCCCCCCTGAGCTTACACAATTCTGCAGCGGCACCGATAACCCATCCCTATGTGTCGATACCATCGCCCCCTTCCTATCTGGTTCCTTCGACCCCGTCAAAGCACTGGAGGGAGAGATCACCGCCACCCTCCAGAAGGCCAGCGAGATCGCTGCTTCCATCTCTAAGCAACTGGAAGATCCCACCACCGCCAAGAACGCCTTGGACGCGCTCAACATCTGCAAGTCTCAGTACGATGACATGTTGGACAGCATAAAGGAGTCTCTGAATCTGGTGGCTCAGATGAACGTGGCGGATGCTTATAACAAAATGAGCGCCGTGATTTCCTACAAATCCAGCTGCGACGACGCTTACACCGAGTCTCCCGGCGTCGAAATGCCCTTCCGCCAGGAAGCCACCACGCTCTTCGAGTTGAGTGGCAATTGCGTCACCGTCCTGGAAACCATCGTTAACAGTCACAAGGTGTAA | 645 | 0.5364 | MQLDLILVSPPKRKKKTCFNQGGETMDHFRFNKTLLLIGALSCLLLSTVASARQLLAAPVPPELTQFCSGTDNPSLCVDTIAPFLSGSFDPVKALEGEITATLQKASEIAASISKQLEDPTTAKNALDALNICKSQYDDMLDSIKESLNLVAQMNVADAYNKMSAVISYKSSCDDAYTESPGVEMPFRQEATTLFELSGNCVTVLETIVNSHKV* | 215 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vra8g1305 | 214 | PANTHER | PECTINESTERASE | 61 | 212 | - | - | |
| Vra8g1305 | 214 | PANTHER | PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR | 61 | 212 | - | - | |
| Vra8g1305 | 214 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 64 | 207 | IPR035513 | - | |
| Vra8g1305 | 214 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 64 | 209 | IPR035513 | - | |
| Vra8g1305 | 214 | CDD | PMEI-like_2 | 62 | 201 | - | - | |
| Vra8g1305 | 214 | TIGRFAM | PME_inhib: pectinesterase inhibitor domain | 36 | 207 | IPR006501 | GO:0004857 | |
| Vra8g1305 | 214 | Pfam | Plant invertase/pectin methylesterase inhibitor | 65 | 202 | IPR006501 | GO:0004857 | |
| Vra8g1305 | 214 | SMART | PMEI_2 | 59 | 204 | IPR006501 | GO:0004857 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vra8g1305 | Vra-Chr8 | 28946083 | 28946727 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vra8g1305 | - | - | pvu:PHAVU_007G213600g | 316.62 |
Event-related genes