Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1295 ATGGCAACAATAGCAGGTGGCGTCACTCTTTCCAGCCCAAGGACAGTATTTGCTAATGCCAAGGGATCAGACTCTGCGCCAAAGGCCCAGGCAATTAGGTTCCCACTCTTCAGGCCCACACATAAGTGGCCCGCTTTGGTTGGGGTGGGGAAGGCCCGGCCCATTCATGCAACGCCGGAAAAGATAGCGGATAAGGTGGAGGAGAGCATAAAGAGCGCGGAGGAGACCTGCTCGGGAGGCGGGACTGACGCGGAATGCGCAGCGGCTTGGGATGAGGTGGAGGAGCTGAGCGCTGAGGCGAGCCACGCCAGAGCGAAGCAGAAGGAGTCTGACCCGCTGGAGAGCTTCTGCAAGGACAACCCTGAAACCGATGAGTGCCGCACTTATGATAATTAA 396 0.5783 MATIAGGVTLSSPRTVFANAKGSDSAPKAQAIRFPLFRPTHKWPALVGVGKARPIHATPEKIADKVEESIKSAEETCSGGGTDAECAAAWDEVEELSAEASHARAKQKESDPLESFCKDNPETDECRTYDN* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1295 131 PANTHER CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC 1 131 IPR039314 -
Vra8g1295 131 Pfam CP12 domain 62 130 - -
Vra8g1295 131 MobiDBLite consensus disorder prediction 97 131 - -
Vra8g1295 131 PANTHER CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC 1 131 - -
Vra8g1295 131 SMART CP12_2 62 131 IPR003823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1295 Vra-Chr8 28870323 28871184 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1295 - - gmx:100814289 209.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0769 3 7931376 7932132 Vra8g1295 8 28870323 28871184 PCT