Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0769 ATGGCAACCATGACTGGTGTTAGTCTTTCAAGCCCCAGAGTGTTGTTCAACGCATCTGGCTCACCCAAAAATGCGCAAGCCTTAAAATTCGCACTTCCACTGCGCCAACGTATGCGACCGGGTGGTGTCCAGGTGGGTCGGGTGCTGAGGATCCAACCCGTTCGCGCAGCGCCGGATAAGATATCGGAGAAGGTGGAGGAAAGCATAAAGAACGCGCAGGAAGCGTGCGCGGGCGATCCGACAAGCGGCGAGTGTGTGGCGGCGTGGGACGAGGTGGAGGAGCTGAGCGCTGCGGCGAAAGACGCGAGGGACAAGCAAAAGGAAAAGGATTCGGACCCTCTGGAGACCTTCTGCAAGGACAACCCAGAAACCATAGAGTGCAAAACTTTCGATGAATGA 399 0.5639 MATMTGVSLSSPRVLFNASGSPKNAQALKFALPLRQRMRPGGVQVGRVLRIQPVRAAPDKISEKVEESIKNAQEACAGDPTSGECVAAWDEVEELSAAAKDARDKQKEKDSDPLETFCKDNPETIECKTFDE* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0769 132 SMART CP12_2 61 132 IPR003823 -
Vra3g0769 132 MobiDBLite consensus disorder prediction 97 119 - -
Vra3g0769 132 PANTHER CALVIN CYCLE PROTEIN CP12-1 1 132 - -
Vra3g0769 132 Pfam CP12 domain 61 131 - -
Vra3g0769 132 PANTHER CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC 1 132 IPR039314 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0769 Vra-Chr3 7931376 7932132 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0769 - - gmx:100812168 224.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0769 3 7931376 7932132 Vra8g1295 8 28870323 28871184 PCT