Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1293 ATGGGGACTGATGAAGTACCAATGGACGACAAGGCGAAGAGGATGAGAGATCTGCTATCGAGTTTCTACTCACCAGACCCTTCCAACTCCAACACCTCCTCCCACAACGCTTCCCTTGACGATATCAATTCCACCTCCTTCGATCCCGATCAGTACATGAACATCCTGGCGTACAAGTCCAATTTGGAAGGGCTGCTTCAACGTCACGTTGAAATGGCTGCTGAAATAAAGAATCTCGACACCGACTTGCAAATGCTGGTCTACGAGAATTACAACAAGTTCATTAGTGCCACAGACACTATAAAGAGAATGAAGAGTAACATTTCAGGGATGGAGGCGAACATGGAACAGCTTCTTGAGAAGATCATGTCTGTGCAGTCAAGAAGTGACAGTGTCAACACTTCTCTATTTGACAAAAGGGAGCATATCGAGAAGGTGCATCGGACTTGTAATCTTCTTCGTAAAGTTCAGTTCATATATGATCTACCCGATAGACTAGGTAAGTGCATCAAGGCAGAGGCTTACGCAGATGCCGTCAGGTTCTATACTGGAGCAATGCCAATTTTTAAGGCATATGGAGATTCATCATTCCGGGATTGTAAGCAAGCTTCTGAAGAAGCAATGGCTACCATAGTAAAAAACTTACAGGGGAAGCTATTTTCAGATTCTGAATCAATACAAGTGAGAGCTGATGCAGCAGTGCTTCTTAAGCAGTTGGATTTTCCGGTGGATAATTTAAAGACGAAGTTATTTGAAAAGTTAGAACAATCTATTACAGACATTCGACTTAACCCTATAGAAGTAAACAATGCATCCAGGGACTATTCTGCTCACGAGGCAGCTGTTCATGAATTTGTGGAGGCAGTTCGTGCATTTAGAGTTATATTTCCTGATTCCGATGAACAATTGGTTAAACTTGCTGAAGACTTAGTTACCAAGAACTTTGTAATTGCCGAGGAATATGTAAAGACACGGATTTGCCCAGATGATCTACTTGGTGTTCTTCGAGTTATCTGGAATGATGTGCTCCTAATAGATGAAGTCTTGCAGGAAGCAGCTCTCTCAAACCATTCTCTTGAGGCTGCAAAGGTTGTCCTCATGTCATTTGTTAGAAGTGCATTTTCTCATCTTCTGCAAGACATCTCAGGCTCCCTCTTACAAATCCTGAAAAAGGATGGTGCAGAACAGTGCTCTCTTGATATTGTTCTTGACGCAAGTACAAAATCAGTTCTTCAAGGAAGCTTGAATGTCTTGTTGGATTTCCGCAAAATTTTAGATGAAAACTCTGGGATCGTAGTTAGATTAAGAGAGTTAATTATTGATTGGGTTCAAGAAGGACTTCAGGACTTTTTTACGAAACTGGAGGATCAGTTCCTTCTATTATCAGGTAGAAGTAACTCATCTATTCAAGCACACGGTTTGGCAGAGGGTGCTCAAGGGGATAAAGCTTTTGCTGGCCTTGTCCTTGTGCTGGCCCAGTTGTCTGCTTTCATTGAACAAACTGTCATCCCAAAAGTCACCGAGGAAATAGCTTCTTCCTTTTCTGGGGGTAGCATTAGAGGTCATGAATCTGGACCTGCCTTTGTTCCTGGAGAAATATGTCGAAAATTTCGGTCAGCTGGTGAAAAGTTCCTGCATTTGTACGTAAATATGAGAACTCAGAGGGTATCATTTCTCCTGAAGAAGAGGTTTACCACCCCTAATTGGGTTAAGCATAAAGAGCCAAGAGAAGTTCATATGTTTGTTGATCTGTTTCTTCAAGAGCTTGAAGGTATAGTTAAGGAAGTGAAGCAGATATTGCCTCAAGGTAGACTTAAGCACCGTAGGACTGATAGTAATGGAAGTAGTGCTTCCTCAAGGAGCAACCCATTAAGGGAAGAGAAACTGGGTAGGTCAAACACTCAAAGGGCAAGGAGCCAGCTTTTGGAAACGCATCTGGCAAAGTTGTTTAAGCAGAAAGTTGAAATTTTTAACAAAGTAGAATATACACAGGAGTCTGTTGTTACAACTTTAGTTAAATTGTGTCTTAAAAGTTTACAAGAATTTGCCCGACTCCAGACTTTTAACCGAAGTGGATTCCAGCAAATTCAAGTAGACATCCAATTCCTAAGGATCCCTTTAAGGGATATAGTTGAAGATGAAGCTGCAATCGACTTCTTGCTTGATGAGGTGATTGTTGCCACCGCAGAACGGTGTCTAGATCCGGTTCCATTGGAGCCTCCCATATTGGACAAACTTATACGAGCAAAGTTGGCTAAAACCGAGCAGCAAAATACAACTTCTTCATAA 2289 0.4181 MGTDEVPMDDKAKRMRDLLSSFYSPDPSNSNTSSHNASLDDINSTSFDPDQYMNILAYKSNLEGLLQRHVEMAAEIKNLDTDLQMLVYENYNKFISATDTIKRMKSNISGMEANMEQLLEKIMSVQSRSDSVNTSLFDKREHIEKVHRTCNLLRKVQFIYDLPDRLGKCIKAEAYADAVRFYTGAMPIFKAYGDSSFRDCKQASEEAMATIVKNLQGKLFSDSESIQVRADAAVLLKQLDFPVDNLKTKLFEKLEQSITDIRLNPIEVNNASRDYSAHEAAVHEFVEAVRAFRVIFPDSDEQLVKLAEDLVTKNFVIAEEYVKTRICPDDLLGVLRVIWNDVLLIDEVLQEAALSNHSLEAAKVVLMSFVRSAFSHLLQDISGSLLQILKKDGAEQCSLDIVLDASTKSVLQGSLNVLLDFRKILDENSGIVVRLRELIIDWVQEGLQDFFTKLEDQFLLLSGRSNSSIQAHGLAEGAQGDKAFAGLVLVLAQLSAFIEQTVIPKVTEEIASSFSGGSIRGHESGPAFVPGEICRKFRSAGEKFLHLYVNMRTQRVSFLLKKRFTTPNWVKHKEPREVHMFVDLFLQELEGIVKEVKQILPQGRLKHRRTDSNGSSASSRSNPLREEKLGRSNTQRARSQLLETHLAKLFKQKVEIFNKVEYTQESVVTTLVKLCLKSLQEFARLQTFNRSGFQQIQVDIQFLRIPLRDIVEDEAAIDFLLDEVIVATAERCLDPVPLEPPILDKLIRAKLAKTEQQNTTSS* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1293 762 Coils Coil 101 128 - -
Vra8g1293 762 MobiDBLite consensus disorder prediction 17 42 - -
Vra8g1293 762 MobiDBLite consensus disorder prediction 604 636 - -
Vra8g1293 762 PANTHER LOW QUALITY PROTEIN: VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 51 HOMOLOG 1 723 - -
Vra8g1293 762 PANTHER UNCHARACTERIZED 1 723 IPR014812 -
Vra8g1293 762 Pfam Vps51/Vps67 42 127 - -
Vra8g1293 762 MobiDBLite consensus disorder prediction 22 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1293 Vra-Chr8 28847897 28857421 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1293 K20296 - gmx:100818891 1319.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g1293 8 28847897 28857421 Vra8g1293 8 28847897 28857421 ECH
Vra3g0767 3 7915167 7924312 Vra8g1293 8 28847897 28857421 PCT