Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0767 ATGGACATCGATGATACACTATTGGACGAGAAAGCAAGAAGAACGAGAGATCTGCTCGCCAGTTTCTACTCTCCAATCCCTTCAGCGTCCTCCAACAATCCTTTTTCCAAACACATCTCACCCGATGACATCAATTCCTCTTCCTTCCAACCTGATCAGTACATGAAAATCATGGCGCGAAAGAGCAATTTGGAAGGTCTACTCCAGAAGCACGTTGAAATGGTAGCTGAAATAAAGAATCTAGACACTGACTTGCAAATGCTCGTCTACGAGAATTATAACAAGTTTATCTGCGCTACAGATACTATAAAGAGGATGAAGAGTAATATTTTAGGGATGGAGGAAAATATGGAACAGCTTCTTGAGAAGATAATGTCTGTACAATCAAGGAGTGATAGCGTTAACACTTCTCTGTGCGAAAATAGGGAGCATATAGAGAAAATGCATCGGACATGCAATCTTCTTCGTAAAGTTCAGTTCATATATGACCTACCTGATAGATTAGGCAAGTGCATCAAGTCTGAGGCCTATGCAGATGCAGTCAGGTTCTACATCGGTTCAATGCCAATTTTTAAGGCCTATGGAGACTCATCATTCCAAGATTGTAAGCGAGCATCTGAAGAAGCAATAGCTATCATAGTAAAAAATTTGCAGGGAAAAGTATTTTCAGATTCTGAATCAATGCAAGTGAGAGCCGAGGCCGCAGTTCTCTTGAAACAGTTGAATTTTCCTGTGGAATATTTGAAGACAAAGCTACTAGAGAAGTTGGAGCTTTCGCTTACAGACGTGCAGATTATCCCTGAAGTAATGAAGAATGAGTATCCCTCTGTTCACGAGGCAGCCATTAACGAGTTCGTGGAGGCCCTTCGTGCATTTCGAGTAATATTTCCAGATTCAGAAAAGCAATTAGTTAAACTTGCTCAAGACCTGCTGACCAAGTACTTTGTAATTATAGAAGCGTATGTGATGACACGGATTTGTTCAGAAGATCTACTTGGCGTTCTTAGAGTTATCTGGAATGACGTGCTCCGATTGGTTGAAGTCTTAGAGGATATATCTCTCTCAAATAATTCCCTCGAGGCTACCAAGAATGCTGTCAAGCTGTACATTAGAAGTGCATTTTTTCATCTAATGCAAGACATCTCAGATCACCTCTTAAAAGTGCTGAAACGGGGTGGAGCAGAGGAGTACTCATTGGAAGTTGCCTTAGATGCTAGCATCAAAGCAGTTTACGACGGAGGCAGGAACGTTTTGCTGGATATCCACAAAATTCTAGATGACAACTTAGAGATTGTAGATAAACTAAGAGAGTTAATAATCGATTGGGTTCAACAAGGATATCAAAATTTTTTTAGGGAACTTGAGGTTCAGTTCCTTTCGTTTTTAGGAAGAAACAATTCTTCAGCTACTCAAAGTCATGGTTTGGAGGGAGCTCAAGGTGACAAAGCCTTTCCTCGCCTTGCTCTGGTGTTGGCCCAACTGTCTGCTTTTATTGGACAAACTGCCATACCAAAAATCACCGAGGATTTAGCAGCTTCCTTTTGTCGTGGAAGTGCTGGAGGTTATGACTATGTACTGTCCTTTGTTCCTGGAGTGATCTCTCAAAAATTTAGGGCAGCTGGTGAAAAGTTCTTGCAGCTGTACATAAATATGAGAACTCAGAGAATATCACTTCTCCTGAAGAAGAGGTTTGCCACACCCAATTGGGTTAAGCACAAGGAACCGAGAGAAGTTCATATGTGTGTTGATTTATTTCTACAAGAGCTAAAAATTACTGGTAATGAAGTGAAGCAGATTTTGCCTCAAGATTTGACGAAGCACCGAAGAGCTGATAGTAATGGGAGCTCTGCTTCATCAAGAAGCAACTCTTTCCGGGAGGAGAAGGAGAAGTTGAGTCGCTCTAATATTCAGAAGGGAAGGAGCCAACAGCTTTTGGAAACACACCTAGCCAAGCTGTTTAAGCAAAAGGTTGAAATTTTCACAAAAGTAGAATATACACAGGAATCAGTGGTTATGACCATTGTTAAATTGTGCCTTAAAAGTTTACAAGAATATGCTAGGCTCCAGACTTTTAACCGGAGTGGATTTCAGCAAATTCAATTGGATATTCAGTTCTTGAGGACTCCATTGAAAGAAATAGTTGAAGATGAAGCTGCAATGGATTTTTTGCTTGATGAGGTGATTGTTGCCGCTGTAGAGCGATGCCTTGATCCAATTCCTTTGGAGCTCCCCATATTGGATAGACTTATACAGGCAAAACTGGCACAACATAAGGAATTCGATATAATATCTCCATAG 2298 0.4082 MDIDDTLLDEKARRTRDLLASFYSPIPSASSNNPFSKHISPDDINSSSFQPDQYMKIMARKSNLEGLLQKHVEMVAEIKNLDTDLQMLVYENYNKFICATDTIKRMKSNILGMEENMEQLLEKIMSVQSRSDSVNTSLCENREHIEKMHRTCNLLRKVQFIYDLPDRLGKCIKSEAYADAVRFYIGSMPIFKAYGDSSFQDCKRASEEAIAIIVKNLQGKVFSDSESMQVRAEAAVLLKQLNFPVEYLKTKLLEKLELSLTDVQIIPEVMKNEYPSVHEAAINEFVEALRAFRVIFPDSEKQLVKLAQDLLTKYFVIIEAYVMTRICSEDLLGVLRVIWNDVLRLVEVLEDISLSNNSLEATKNAVKLYIRSAFFHLMQDISDHLLKVLKRGGAEEYSLEVALDASIKAVYDGGRNVLLDIHKILDDNLEIVDKLRELIIDWVQQGYQNFFRELEVQFLSFLGRNNSSATQSHGLEGAQGDKAFPRLALVLAQLSAFIGQTAIPKITEDLAASFCRGSAGGYDYVLSFVPGVISQKFRAAGEKFLQLYINMRTQRISLLLKKRFATPNWVKHKEPREVHMCVDLFLQELKITGNEVKQILPQDLTKHRRADSNGSSASSRSNSFREEKEKLSRSNIQKGRSQQLLETHLAKLFKQKVEIFTKVEYTQESVVMTIVKLCLKSLQEYARLQTFNRSGFQQIQLDIQFLRTPLKEIVEDEAAMDFLLDEVIVAAVERCLDPIPLELPILDRLIQAKLAQHKEFDIISP* 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0767 765 Pfam Vps51/Vps67 44 129 - -
Vra3g0767 765 PANTHER UNCHARACTERIZED 1 726 IPR014812 -
Vra3g0767 765 PANTHER LOW QUALITY PROTEIN: VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 51 HOMOLOG 1 726 - -
Vra3g0767 765 Coils Coil 103 130 - -
Vra3g0767 765 MobiDBLite consensus disorder prediction 603 638 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0767 Vra-Chr3 7915167 7924312 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0767 K20296 - gmx:100818891 1048.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0767 3 7915167 7924312 Vra3g0767 3 7915167 7924312 ECH
Vra3g0767 3 7915167 7924312 Vra8g1293 8 28847897 28857421 PCT