Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1289 ATGGAAAAGAAAGAGAGAAAGATTATGGTGGCTGTGGATGAGAGCCAAGAGAGCATGTATGCACTTTCATGGTGCATCACCAATCTTGTTTCTGATACCAACAAGCTTGTGCTTCTTTATGTTAAACCACCCTCTGCTTTCTACTCCTTGGATGCTGCAGGGTATATCTTTTCCAATGATGTTATTGATGCTATGGAAAAGTACAGTATGCACCTGGTTAATTCAGTGATGGAAAGAGCTGAAGCCACATGTAGAAATTTGAAGGCTACAAATGTGAACATGGAGAGGGTAGTTGGGGTAGGAGATGCGAAGGATGTGATATGCAGTGTGGCGAAGAAACTAGAAGCTGATACCTTGGTCATGGGAAGCCATGGCTATGGATTCTTTAAGAGGGCAATCCTTGGAAGTGTTAGTGATCACTGTGCAAAACATGCAGAGTGTCCGGTTGTAATCGTGAAGCACCCGTGA 468 0.4359 MEKKERKIMVAVDESQESMYALSWCITNLVSDTNKLVLLYVKPPSAFYSLDAAGYIFSNDVIDAMEKYSMHLVNSVMERAEATCRNLKATNVNMERVVGVGDAKDVICSVAKKLEADTLVMGSHGYGFFKRAILGSVSDHCAKHAECPVVIVKHP* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1289 155 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 2 154 - -
Vra8g1289 155 Coils Coil 77 97 - -
Vra8g1289 155 Gene3D HUPs 1 155 IPR014729 -
Vra8g1289 155 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 6 154 - -
Vra8g1289 155 PRINTS Universal stress protein signature 5 23 IPR006015 -
Vra8g1289 155 PRINTS Universal stress protein signature 113 125 IPR006015 -
Vra8g1289 155 PRINTS Universal stress protein signature 131 153 IPR006015 -
Vra8g1289 155 Pfam Universal stress protein family 6 153 IPR006016 -
Vra8g1289 155 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 2 154 - -
Vra8g1289 155 CDD USP_Like 7 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1289 Vra-Chr8 28791759 28792767 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1289 2 49 Receptor kinase-like Gene Family AT5G35380 45.098 2.31e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1289 - - gmx:100306535 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g1289 8 28791759 28792767 Vra8g1289 8 28791759 28792767 ECH
Vra8g1289 8 28791759 28792767 Vra3g0890 3 8969768 8971142 ECH