Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1285 ATGGGTAACCAAGTCTCACTTCGTCCCTCAGATGGCAGGGGCAAAATCGTGTTGTGGGACGGTTCCGTGCATGAAATTGAGCAATCGGTGACGGTGGCGGAGCTGATGCTGGAGCACCCAGAACAGGTGGTGGTTGAGTTGCATTCGGCAGTGAACCAGAAAAGGCCAACGCCATTGCCGGCTGATAACAAGTTAGAAACAAACAAGGCGTATCTGATGCTTCCCGTGAGGCGAGGGAAGCCCGTTGGGTTAAGCGGGGAAGAAACTCGACGCATTCTCTTCATCCTTAATTCTGCTCTGCATTCAAAGTCTCTTGTGGGTTCCTCAAAGTTTGTTCCTTGGCTTACGCGTTTGTGCCAAAACACTACAATTGTGGAACCAGGGAGAAAGGAAGAGGAAAGAGAGAAGAACGAAGAAAGGTGTCAGTTTTCAGAGCTTCTGCCGGAAATTCTAGAAGCGAGGCCGGAGTATTTGAACAGGCAATTGTCGGGAAAAGGGTGGAAACCTACTTTGGACACCATTAAGGAGAAGAACATTGACAGAAAACACAGTCATTGGTTGTTCTCAGGACTTTCTATTCCTGCACATTTAACCTCTACCAAACTTTAG 609 0.4811 MGNQVSLRPSDGRGKIVLWDGSVHEIEQSVTVAELMLEHPEQVVVELHSAVNQKRPTPLPADNKLETNKAYLMLPVRRGKPVGLSGEETRRILFILNSALHSKSLVGSSKFVPWLTRLCQNTTIVEPGRKEEEREKNEERCQFSELLPEILEARPEYLNRQLSGKGWKPTLDTIKEKNIDRKHSHWLFSGLSIPAHLTSTKL* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1285 202 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 186 - -
Vra8g1285 202 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 1 186 - -
Vra8g1285 202 Pfam PADRE domain 1 176 IPR025322 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1285 Vra-Chr8 28773694 28774591 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1285 - - gmx:100784884 299.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g1285 8 28773694 28774591 Vra8g1285 8 28773694 28774591 ECH
Vra3g0759 3 7839830 7840716 Vra8g1285 8 28773694 28774591 PCT