Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0759 ATGGGAAACCAAATAGCCACCGCCAAAATCGTCTACTGGGATGGTTCCGTTCAAGAGTTTCACGACCCGTTAACCGTGGCAGAGCTCATGATGGACCACCCACAACAGGTTGTGCTTGATTTTCACTCCGCCGTCAAGCAGAAAAGGCCAACACCGCTGCCGGCAGACCAAAAGCTGGAGATGAAGAAAACCTACGTGATGGTTCCGGTGAAGCAGGGGAAGCCTGTGGGGTTGAGCAGCGAGGATAGTCGCCGCATTCTCTTCATCGTTAACTCTGCTCTGCATCCCAAGTATTTTGTTTCCTCTTCGGGGTTTCTTCATTGGCTTGCAGGGCTGTTCAACTCCGAGAGAGAGGTTGCAGTGTTGCAGGAAAAAGAAGAGACGGAGAAGGCCCAAGAGGAGTACGGGTTTTGTGAGTTTTTGCCAGAGATGGTAGAAGGGAGACCAGAGTATTTAAGTAGGCAGTTATCGGGTAAAGGTTGGAGGCCTAGTTTGGACACCATTAAAGAGAAGAAGGTTAACACAAAACTATCTCGATGGTTATTGTTCCTTAAAACCTTCACTGCTGCAAAGATTTAG 579 0.487 MGNQIATAKIVYWDGSVQEFHDPLTVAELMMDHPQQVVLDFHSAVKQKRPTPLPADQKLEMKKTYVMVPVKQGKPVGLSSEDSRRILFIVNSALHPKYFVSSSGFLHWLAGLFNSEREVAVLQEKEETEKAQEEYGFCEFLPEMVEGRPEYLSRQLSGKGWRPSLDTIKEKKVNTKLSRWLLFLKTFTAAKI* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0759 192 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 1 180 - -
Vra3g0759 192 Pfam PADRE domain 1 170 IPR025322 -
Vra3g0759 192 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0759 Vra-Chr3 7839830 7840716 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0759 - - var:108328709 360.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0759 3 7839830 7840716 Vra3g0759 3 7839830 7840716 ECH
Vra3g0759 3 7839830 7840716 Vra8g1285 8 28773694 28774591 PCT