Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1270 ATGCCGGGAGAAGAATATGATGGTGTCGCCGGAGAACAGCGAAGACCTCTCATCATCAACCATGATTTTGATTCTTCAGTTGACATCCTTCATCAAAATGAAGACACTATCTCTCCTTTGCCATTCAGTCATACAGAAACACTAGCTTTACCCTCTCTTCCCGTTCCTAACCAACGCCTTGCTTCTCTCGATGTCTTCCGCGGTCTAACCGTTGCGTTGATGATATTAGTTGATGACGTCGGAAGAGCATTCCCATCCTTGAATCATTCACCATGGTTTGGGGTGACACTAGCAGATTTTGTAATGCCATTTTTTCTCTTTGTGGTTGGCATTTCGATTGCTCTTGTATTCAAGAAAGTCTCTAGCAAACCCAATGCCACGAAGAAAGTTGTATTGAGGACAATTAAGCTTTTCCTTTTGGGGCTGTTACTTCAAGGTGGGTATTTCCATGGACGTGGCAAATTGACGTATGGAGTTGATTTGAGTAAAATTCGCTGGCTTGGTGTACTTCAGAGGATATCTATTGGATATTTCTTGGCCTCAATATCGGAGATTTGGCTTGTAAACCATAATATTTTGGTTGACTCACCGACAGCTTTTGTGAGGAAATACTCCATTCAGTGGATGGTTTCGATCTTACTATGCTCAGTGTACCTTTGCTTGCTCTACGGTCTCTACATTCCAAATTGGAAATTTGAACATTCTAATATGCTTGGGTCCAGTCATTTATCAATTATTCAAAATGTTCATTGTGAAGTGAGGGGTAGTCTCGAACCTCCTTGTAATGCAGTGGGATTTGTTGATAGATTGATTCTTGGTGAATATCATATGTACCAGCGACCTGTGTATATAAGGACAAAGGAGTGTAGTGTCAACTCTCCTGACTATGGACCCTTGCCTCCAAATTCACCTGGATGGTGCCTTGCACCATTTGATCCAGAGGGTATTTTGAGTTCACTCATGGCTGCAATTACTTGCTTCATGGGATTGCAATATGGTCGCATAATTGTACTTTTGCAGGATAACAAGCAGAGGGTACTTCTTTGGTCTGTGTTTTCCTTCGCTCTATTGTTAGTAGGATACATTCTGGAGATTTTAGGAATTCCTTTATCAAAAGCACTGTACACGTTAAGCTACATGTTCATAACTGCAGGAGCATCGGGCTTAGTCTTGACTGCTATCTATTACATTGTTGACATAGAACATCACAGAAAGCCTACAATTTTACTGCAATGGATGGGAATGAATGCTCTTGTCGTATATGCATTGGCAGCTTGTGACATTTTCCCTGCAGCTATCCAGGGTTTCTATTGGCATTCTCCTGAAAATAATTTGGTTGACGCCAGTGAAGCTTTAATGCAGGCCATATTTCATTCCGAAAAGTGGGGTACAATGGCCTTTGTAATCGTTGAGATTTTATTCTGGGGTATTTTTTCTGGTTTCCTCCACAAGAAAGGGATATATATAAAATTGTAA 1476 0.4106 MPGEEYDGVAGEQRRPLIINHDFDSSVDILHQNEDTISPLPFSHTETLALPSLPVPNQRLASLDVFRGLTVALMILVDDVGRAFPSLNHSPWFGVTLADFVMPFFLFVVGISIALVFKKVSSKPNATKKVVLRTIKLFLLGLLLQGGYFHGRGKLTYGVDLSKIRWLGVLQRISIGYFLASISEIWLVNHNILVDSPTAFVRKYSIQWMVSILLCSVYLCLLYGLYIPNWKFEHSNMLGSSHLSIIQNVHCEVRGSLEPPCNAVGFVDRLILGEYHMYQRPVYIRTKECSVNSPDYGPLPPNSPGWCLAPFDPEGILSSLMAAITCFMGLQYGRIIVLLQDNKQRVLLWSVFSFALLLVGYILEILGIPLSKALYTLSYMFITAGASGLVLTAIYYIVDIEHHRKPTILLQWMGMNALVVYALAACDIFPAAIQGFYWHSPENNLVDASEALMQAIFHSEKWGTMAFVIVEILFWGIFSGFLHKKGIYIKL* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1270 491 PANTHER OS05G0155700 PROTEIN 12 491 - -
Vra8g1270 491 Pfam Heparan-alpha-glucosaminide N-acetyltransferase, catalytic 59 182 IPR012429 -
Vra8g1270 491 PANTHER LD22376P 12 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1270 Vra-Chr8 28568094 28574887 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1270 K10532 - gmx:100802361 836.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0443 3 5129469 5134601 Vra8g1270 8 28568094 28574887 PCT