Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0443 ATGGATGAAGGAACTAAGAGAATGGAAGAAGGCCTGAATTCACCATTGAATGGAGATGGTATTAAGAATGGTTTGAAGAAGCAGGTAACCATAAAAAGCAGTGACGGAGGTTCTACCGTTGAGCATGACAGAGACACAACGGCTGTGGATGAGTCGGCGGAGCCACCACTGGTTAAGAAGAAGACCAAGAGAGTTGCCACCCTCGATGCATTTAGGGGTCTCACCATCGTGTTGATGATCCTGGTAGACGATGCTGGTGAAGCTTATCCACGCATTGATCACTCTCCATGGAATGGATGTACTTTGGCCGATTTCGTTATGCCGTTCTTTCTTTTCATTGTTGGGGTTGCCATAGCCCTTGCACTCAAGAGAATCCCCAAGAAAAAGGATGCTGTAAAGAAGATAATTCTTAGGACAATTAAACTTCTCTTCTGGGGTATAATTTTGCAAGGGGGTTACTCTCATGCTCCTAATGATCTTGAATATGGAGTTAACATGAAATTTATCCGATGGTGTGGCATTCTCCAGAGAATAGCTCTTGTATACTGTGTTGTAGCTCTAATAGAGACATTTACCACCAAGCTTAGACCCACAACGTTGAGTTCTGGAAACCTATCCATTTTTACTGCTTATAAATGGCTTGGAGGTTTTGTAGCATTTCTCATTTACATGATCACAACCTTCACTCTCTACGTTCCTGATTGGAGTTTCGTGGATCGTTTTAACGGCGATGAACCGAAGAGATACACGGTCATTTGTGGGATGAGAGGACACCTAGGGCCAGCATGTAACGCTGTCGGATACGTGGACCGACAGGTTTGGGGGGTCAACCATCTTTATTCTCAACCTGTGTGGAGACGCTTAAAGGCGTGTACCCTAAATTATCCTGGAGATGGTCCTTTCCGTGAGGATGCTCCAAGTTGGTGTCGTGCTCCTTTTGAGCCTGAAGGCTTGTTGAGTTCTATATCAGCGATCATCTCTGGCACTATTGGGATCCACTATGGGCACGTCTTGATTCACTTCAAGGGTCATTTGGAGAGGCTAAAACACTGGATCTTAATGGGGCTTGTGTTACTCATCATAGCCATAATCCTTCACTTCACAGATGCTATCCCAATTAACAAGCAACTCTACAGTTTCAGCTATGTTTGTTTCACAGCTGGGGCAGCTGGAATTGTTTTCTCTGGGTTCTACATACTGATCGATGTTTTGGGGCTCCGAACTCCATTTTTGTTCTTGGAATGGATAGGAATGAATGCTATGCTAGTATTCGTGATGGCAGCTCAGGGAATATTTGCAGCTTTTGTAAATGGATGGTATTATGAAGATCCACGTAACTCCCTAGTACACTGGATCAAGAAGCATGTGTTTGACAATGTCTGGCACTCGGAGAGAGTGGGAACCATAATGTATGTCATCTTTGCAGAAATCACATTCTGGAGCGTGGTTTCTGGCGTCTTACACAAATTACGAATATATTGGAAACTATAA 1491 0.4393 MDEGTKRMEEGLNSPLNGDGIKNGLKKQVTIKSSDGGSTVEHDRDTTAVDESAEPPLVKKKTKRVATLDAFRGLTIVLMILVDDAGEAYPRIDHSPWNGCTLADFVMPFFLFIVGVAIALALKRIPKKKDAVKKIILRTIKLLFWGIILQGGYSHAPNDLEYGVNMKFIRWCGILQRIALVYCVVALIETFTTKLRPTTLSSGNLSIFTAYKWLGGFVAFLIYMITTFTLYVPDWSFVDRFNGDEPKRYTVICGMRGHLGPACNAVGYVDRQVWGVNHLYSQPVWRRLKACTLNYPGDGPFREDAPSWCRAPFEPEGLLSSISAIISGTIGIHYGHVLIHFKGHLERLKHWILMGLVLLIIAIILHFTDAIPINKQLYSFSYVCFTAGAAGIVFSGFYILIDVLGLRTPFLFLEWIGMNAMLVFVMAAQGIFAAFVNGWYYEDPRNSLVHWIKKHVFDNVWHSERVGTIMYVIFAEITFWSVVSGVLHKLRIYWKL* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0443 496 Pfam Heparan-alpha-glucosaminide N-acetyltransferase, catalytic 64 207 IPR012429 -
Vra3g0443 496 MobiDBLite consensus disorder prediction 1 54 - -
Vra3g0443 496 PANTHER LD22376P 1 496 - -
Vra3g0443 496 MobiDBLite consensus disorder prediction 37 54 - -
Vra3g0443 496 PANTHER HEPARAN-ALPHA-GLUCOSAMINIDE N-ACETYLTRANSFERASE-LIKE PROTEIN 1 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0443 Vra-Chr3 5129469 5134601 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0443 K10532 - gmx:100819967 900.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0443 3 5129469 5134601 Vra3g0443 3 5129469 5134601 ECH
Vra3g0443 3 5129469 5134601 Vra8g1270 8 28568094 28574887 PCT
Vra8g2128 8 39353302 39357984 Vra3g0443 3 5129469 5134601 PCT