Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1264 ATGTTGTGGCTCATGAGATTCTCGGGCTTTTTCTCCGCCGCAATGCTCCTCATTCTCCTCTCCCCCTCCCTCCAATCCTTCCACCCCGCCGAAGCCATCCGCTCCTCCCACCTCGACGCCGTCCTCCGCCTCCCGCTCCAGACGTCACCACTCTCATTCCGCCGCGCCGCCCCATTCCGCAATGCCGACAAATGCGCCTCTAATCGTACCTCCATTCCCGAGAATACCAGCGTCTGCGATCCCTCCCTAGTCCACGTTGCCATCACTCTCGACGTCGAATACCTCCGCGGCTCCATCGCTGCCGTCCACTCCATCCTCCAACACTCCCAGTGCCCGGAGAACATCTTCTTCCACTTCCTCGTCTCCGAGACCAGTCTACAATCCCTTGTCAAATCGACCTTCCCGCAATTGAACTTCAAGGTCTATTACTTCGATCCGGAGATCGTGCGCAACCTGATCTCAACCTCGGTGCGCCAAGCCCTGGAGCAACCTCTCAACTATGCCAGAAATTACCTCGCGGATCTTCTCGAGAGCTGCGTGGGGAGGGTTATATATCTAGATTCGGATCTAGTTGTGGTGGACGACATTGCGAAACTGTGGAGCACCAGTTTAGGTTCTAGAACAATCGGCGCGCCTGAGTACTGTCACGCGAACTTCACCAAGTACTTTACGGCGGGGTTTTGGTCGGACGCGCGGTTCGCGGGCGCGTTCATGGGGAGGAGACCGTGCTACTTCAACACGGGTGTGATGGTGATAGATCTGGTGCGGTGGCGGAAACACGGTTACAGTAGAAGGATAGAGAGGTGGATGGAGATCCAGAAGAGCGACCGGATCTACGAATTGGGTTCTCTGCCGCCGTTTCTGCTGGTGTTCGCGGGACACGTGTGGCCCATTGAGCACAGGTGGAATCAGCATGGATTGGGTGGCGATAACGTGAAGGGGAGTTGCCGGGACCTTCACGCTGGGCCTGTGAGTCTGTTGCATTGGTCCGGAAGTGGCAAGCCCTGGCTCCGATTGGACTCCAGACGGCCCTGTCCACTTGACGCACTTTGGGCTCCTTATGATTTGTACGGACACTCTCAGTGA 1086 0.57 MLWLMRFSGFFSAAMLLILLSPSLQSFHPAEAIRSSHLDAVLRLPLQTSPLSFRRAAPFRNADKCASNRTSIPENTSVCDPSLVHVAITLDVEYLRGSIAAVHSILQHSQCPENIFFHFLVSETSLQSLVKSTFPQLNFKVYYFDPEIVRNLISTSVRQALEQPLNYARNYLADLLESCVGRVIYLDSDLVVVDDIAKLWSTSLGSRTIGAPEYCHANFTKYFTAGFWSDARFAGAFMGRRPCYFNTGVMVIDLVRWRKHGYSRRIERWMEIQKSDRIYELGSLPPFLLVFAGHVWPIEHRWNQHGLGGDNVKGSCRDLHAGPVSLLHWSGSGKPWLRLDSRRPCPLDALWAPYDLYGHSQ* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1264 361 Pfam Glycosyl transferase family 8 85 338 IPR002495 GO:0016757
Vra8g1264 361 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 85 344 IPR029044 -
Vra8g1264 361 PANTHER HEXOSYLTRANSFERASE 7 361 - -
Vra8g1264 361 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 7 361 - -
Vra8g1264 361 SUPERFAMILY Nucleotide-diphospho-sugar transferases 84 358 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1264 Vra-Chr8 28445419 28448433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1264 1 359 Glycosyltransferase AT3G62660 79.834 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1264 - - gmx:100801272 653.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g1264 8 28445419 28448433 Vra8g1264 8 28445419 28448433 ECH
Vra3g0746 3 7745737 7747421 Vra8g1264 8 28445419 28448433 PCT