Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0746 ATGTTTGGGATTACGAGACTCTCGGGGTTTTTCTCCGCCGCAATGTTCGTCATTGTTCTTATCATTCTCTCCCCCTCTTTCCAATCCGAAGCAATTCGATCCTCCCACCGATTTTCCTTCCGGAAGGCTCTCCCCTTCCGTAATGCACACGAATGCGCCTGGGTTTCCGCCCAAACCAAAGTGTGCGACCCTTCTTTAGTCCACGTCGCCATAACTCTCGACGTCGAATATCTCCGCGGTTCGATCGCCGCCGTGCACTCCATCCTCCGCCACGCCCTCTGTCCGGAGAACGTCTTCTTCCATTTTCTCGTCTCCGACACTAATCTTCAAGCCCTGGTGGAGTCCACCTTCCCCCACTTGAAGTTCAACGTCTATTACTTCGATCCTAACACCGTCTCCCACTTGATCTCCTCCTCCGTGCGCCAAGCGCTGGAGCAGCCGCTCAATTACGCCAGGAACTACCTCGCGGACCTTCTCGAGAGTTGCGTGGAGCGAGTTATCTACCTGGACTCCGATCTGGTGGTGGTGGACGACGTGGCCAAGCTTTGGAGCGCGAGTCTGGGCTCACGCGCCATCGGCGCGCCGGAGTACTGCCACGCTAACTTCACGAAGTACTTCACGGCGGGGTTCTGGTCGGAGCCGAGTTTGGCGGGGACGTTCGCGCAGCGGAGGGCGTGTTACTTCAACACGGGGGTGATGGTGATGGATCTGGTGAAGTGGAGGAAGGAGGGGTACACGAGAAAAATCGAGAGATGGATGGAGATTCAGAAGAGTGATCGGATCTACGAGCTGGGTTCGTTGCCGCCGTTTTTGCTGGTGTTCGCTGGACATGTGGCGCCCATCGAGCACCGATGGAACCAGCACGGTTTGGGCGGGGATAACGTGAAGGGTAGTTGTCGTGGGTTGCACCCTGGTCCGGTTAGCTTGTTGCATTGGTCCGGTAGTGGAAAACCCTGGCTCCGTTTACATTCCAAACGTCCTTGCCCTCTCGACTCTCTGTGGGCTCCCTTTGACTTGTACGCACACTCTCCATTTTAA 1038 0.5626 MFGITRLSGFFSAAMFVIVLIILSPSFQSEAIRSSHRFSFRKALPFRNAHECAWVSAQTKVCDPSLVHVAITLDVEYLRGSIAAVHSILRHALCPENVFFHFLVSDTNLQALVESTFPHLKFNVYYFDPNTVSHLISSSVRQALEQPLNYARNYLADLLESCVERVIYLDSDLVVVDDVAKLWSASLGSRAIGAPEYCHANFTKYFTAGFWSEPSLAGTFAQRRACYFNTGVMVMDLVKWRKEGYTRKIERWMEIQKSDRIYELGSLPPFLLVFAGHVAPIEHRWNQHGLGGDNVKGSCRGLHPGPVSLLHWSGSGKPWLRLHSKRPCPLDSLWAPFDLYAHSPF* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0746 345 SUPERFAMILY Nucleotide-diphospho-sugar transferases 67 342 IPR029044 -
Vra3g0746 345 Pfam Glycosyl transferase family 8 68 321 IPR002495 GO:0016757
Vra3g0746 345 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 68 328 IPR029044 -
Vra3g0746 345 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 6 343 - -
Vra3g0746 345 PANTHER GALACTURONOSYLTRANSFERASE-LIKE 6-RELATED 6 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0746 Vra-Chr3 7745737 7747421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0746 1 342 Glycosyltransferase AT3G62660 72.576 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0746 - - gmx:100805221 643.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0746 3 7745737 7747421 Vra8g1264 8 28445419 28448433 PCT