Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1242 ATGGCTCGCTCTTTCACTAACGTTAAGGTTCTCTCTGCTCTTGTCGCCCACGGATTCTCCAACACTGCCACCAGGCGTGGGTTTGCGGCGGCGGCGGCGGCGACACAAAGCGCAACCAGAGGAGGTGCCTCCATCGGCGGCAATATGGTTCCGAAATCAGGGGAAGAGAAGGTGAGAGGCGGTGAAAAGGTTTCGTGGGTCCCAGACCCTGTGACTGGTTACTACAGACCAGAGAACACGAACGAGATTGATGTTGCTGACCTGCGAGCCACTGTTTTGGGCAAAAAATTCAACCAGTAA 300 0.55 MARSFTNVKVLSALVAHGFSNTATRRGFAAAAAATQSATRGGASIGGNMVPKSGEEKVRGGEKVSWVPDPVTGYYRPENTNEIDVADLRATVLGKKFNQ* 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1242 99 PANTHER LATE EMBRYOGENIS ABUNDANT PROTEIN 2-RELATED 1 97 IPR004926 -
Vra8g1242 99 MobiDBLite consensus disorder prediction 40 62 - -
Vra8g1242 99 PANTHER LATE EMBRYOGENIS ABUNDANT PROTEIN 2 1 97 - -
Vra8g1242 99 Pfam Late embryogenesis abundant protein 1 93 IPR004926 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1242 Vra-Chr8 28125721 28126629 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1242 - - vun:114190398 174.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0718 3 7541228 7541925 Vra8g1242 8 28125721 28126629 PCT