Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0718 ATGGCTCCTTCTTTCACCAACGCCAAAATCTTCTCTTCGTTCTTCGCCCATGGATTCTCCAACGCTCTCACTAGACGTGGGTATGCGGTGGCATCACAGAACGCAACAAAAGGAGGAGTGGCTTCCATGAGCTCCAAAATTGCAACAACGTCAGGGGAAGACAAAGGAGTGTCTCCCTACAAGGTTTCCTGGGTTCCAGATCCTGTCTCTGGCTATTACAAACCCGAGAACATTAACGAGGTTGATGTCGCTGAATTGCGCGCTGCGCTTTTGGCCAAAAAAATCAACAACTCGTCTCAATCAATTAATTAA 312 0.4744 MAPSFTNAKIFSSFFAHGFSNALTRRGYAVASQNATKGGVASMSSKIATTSGEDKGVSPYKVSWVPDPVSGYYKPENINEVDVAELRAALLAKKINNSSQSIN* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0718 103 PANTHER LATE EMBRYOGENIS ABUNDANT PROTEIN 2 1 96 - -
Vra3g0718 103 PANTHER LATE EMBRYOGENIS ABUNDANT PROTEIN 2-RELATED 1 96 IPR004926 -
Vra3g0718 103 Pfam Late embryogenesis abundant protein 1 91 IPR004926 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0718 Vra-Chr3 7541228 7541925 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0718 - - vun:114180105 196.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0718 3 7541228 7541925 Vra8g1242 8 28125721 28126629 PCT