Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1205 ATGGACTTGCTGGCATCTTTGTATGCTGACAAGCCAGTGGTGATCTTCAGCAAGAGCACTTGCTGCATTTGCCATTCTGTGAAGGCTCTCATACGCAGCTTCGGTGCCAACCGTACCGATATAGAGGTTGATAAAATGGAAAATGGGGAGCAAATAGAAAGTGCACTGATTCAGCTGGGTTGTCGCCCGACTGTACCAGCAGTGTTCATTGGACAACGATTTATAGGTGGTGCTGACGAACTCATAAGGCTCAACGTCCAGAACCAGCTTGCCCAGTTGCTTTTAAGTGCTGGAGCTATATTTCTTTGA 309 0.4725 MDLLASLYADKPVVIFSKSTCCICHSVKALIRSFGANRTDIEVDKMENGEQIESALIQLGCRPTVPAVFIGQRFIGGADELIRLNVQNQLAQLLLSAGAIFL* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1205 102 PANTHER GLUTAREDOXIN 1 100 IPR011905 -
Vra8g1205 102 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Vra8g1205 102 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Vra8g1205 102 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Vra8g1205 102 Gene3D Glutaredoxin 2 101 - -
Vra8g1205 102 SUPERFAMILY Thioredoxin-like 2 100 IPR036249 -
Vra8g1205 102 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 100 - -
Vra8g1205 102 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Vra8g1205 102 CDD GRX_GRXh_1_2_like 12 93 - -
Vra8g1205 102 TIGRFAM GlrX-like_plant: glutaredoxin-like family 6 101 IPR011905 -
Vra8g1205 102 Pfam Glutaredoxin 13 75 IPR002109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1205 Vra-Chr8 27389781 27390426 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1205 1 102 Miscellaneous Gene Families AT4G15690 46.078 6.45e-31 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1205 K03676 - gmx:106794948 147.517
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g1205 8 27389781 27390426 Vra8g1205 8 27389781 27390426 ECH
Vra3g0675 3 7233809 7234438 Vra8g1205 8 27389781 27390426 PCT
Vra8g1205 8 27389781 27390426 Vra3g0676 3 7241246 7241831 PCT