Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0676 ATGGACTTGAAACCATTGATTGCAGAGAAGCCAGTGGTGATCTTCGGCAAGAGCAATTGTGTCATGAGCCACACAGTGAAGGCTCTGATACGCAGCTTTGGTGCCAACCTTGCAGTTATTGAGGTTGACAAAATGCCAAGTGGCCAACAAGTAGAGAGGGCACTGCTCCAGCTAGGTTGCCGCCCCAGTGTGCCTGCAGTGTTCATAGGACAAGAATTCATAGGTGGTGCTGATGAAGTAATCAAACTAAATGTTCAGAACAAGCTTGCCCAATTGCTGCTCAAGGCTAAAGCCATATTTCTCTGA 306 0.4739 MDLKPLIAEKPVVIFGKSNCVMSHTVKALIRSFGANLAVIEVDKMPSGQQVERALLQLGCRPSVPAVFIGQEFIGGADEVIKLNVQNKLAQLLLKAKAIFL* 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0676 101 PRINTS Glutaredoxin signature 12 30 IPR014025 -
Vra3g0676 101 PRINTS Glutaredoxin signature 57 70 IPR014025 -
Vra3g0676 101 PRINTS Glutaredoxin signature 71 84 IPR014025 -
Vra3g0676 101 PANTHER GLUTAREDOXIN 4 100 IPR011905 -
Vra3g0676 101 TIGRFAM GlrX-like_plant: glutaredoxin-like family 5 100 IPR011905 -
Vra3g0676 101 CDD GRX_GRXh_1_2_like 11 92 - -
Vra3g0676 101 Gene3D Glutaredoxin 1 100 - -
Vra3g0676 101 SUPERFAMILY Thioredoxin-like 4 98 IPR036249 -
Vra3g0676 101 Pfam Glutaredoxin 12 74 IPR002109 -
Vra3g0676 101 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 4 100 - -
Vra3g0676 101 ProSiteProfiles Glutaredoxin domain profile. 1 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0676 Vra-Chr3 7241246 7241831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0676 2 101 Miscellaneous Gene Families AT4G15690 46.000 2.85e-31 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0676 K03676 - gmx:100803979 129.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g1205 8 27389781 27390426 Vra3g0676 3 7241246 7241831 PCT