Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1190 ATGACCGGAGTGGTCATGGTTACCAAGGGTGGTAGATGCGGCGGAGGTGGGAAGCGGTCGAGGGCGGCGCGAACCGCTGAGGAAGAAGAAGAGCAGCAGAACCAGCTCTCTCTCGTGGCGTTTCTCTTGGCGGCCATCAGAAAATCGATGGTTTCGTGCAGGGTGGACCCACCGGACGATGTAATCTCCACCGTCCATAACATGGAGATCGGATGGCCTACCAACGTTCAGCACATCACTCATGTCACCTTCGACCGCTTCAATGGTTTCCTCGGTCTTCCTTACGAGTTCCAAGTTGAGATCCCTGCTAGGGTCCCCAGTGCTAGTGTAAGTGTGTTTGGCGTCTCAGCAGAATCTATGCAGTGTTCTTATGATTCTAAAGGAAACAGTGTCCCCACTATTCTCCTGCTAATGCAGGACCGGCTATACTCACAGAGAGGCTTAAAGGCTGAGGGTATATTTCGCATAAACCCAGAAAATAGTCAAGAGGAGCATGTGAGGGACCAGTTGAATAGGGGCATTGTGCCGGATGACATTGATGTGCACTGCTTGGCGGGACTAATTAAAGCCTGGTTCCGAGAGCTACCTTCAGGAGTGCTAGATGGACTTTCCCCTGAGCAAGTTCTTCAATGCAACACAGAAGAAGAATCTGTTGATCTTGTGAAGCAGCTAAAGCCAACTGAGTCTGCCTTACTCAGCTGGGCCATTGATCTCATGGCCGATGTTGTAGAAGAGGAGGAATTTAACAAAATGAATGCAAGAAATATTGCAATGGTTTTTGCTCCAAACATGACTCAGATGTCCGATCCTCTAACTGCCCTGATGCATGCGGTTCAAGTGATGAACTTACTCAAGACACTCATCATGAAGACACTTCGAGAACGTGAAGAAACAACACCAGGTGGGTATTCTCCCATGTCTTTTCATTCATCGGGTCGCCACTCAGAGGATGAATACGACAGTCAGCGAGAAATGGACACTAGCGGTGAATTGAGAGGCGCCAAATCAGATTATGATGCTCACTATGGCCAAAGCAGCGAAGGGGAGGCTGAATCTTTAAGCGAAATAGAGGAGTGCTTCTTGAAGCAGTTGGATGAGAACACAAAGGGATTCTCACAAGAACCTGATGGTAATTTGGAAAAGTATGTTAGCACCATAAGTTACTCTGCCTATAGCATGGAACCTTCTATATCTGTTACTGATAACAAAGCTGGGAATTCCTGTTTGAGGACAACACTGACCTCAAGTGTTGACACAAGTAGTTCATCAATAGGATGCACAAGTACCAAAGATGTGGAGATAGTCGATAAGTATGCTGATTCTATTTCACCTGTAACACTCCTTGCTTCTAGCTAA 1356 0.472 MTGVVMVTKGGRCGGGGKRSRAARTAEEEEEQQNQLSLVAFLLAAIRKSMVSCRVDPPDDVISTVHNMEIGWPTNVQHITHVTFDRFNGFLGLPYEFQVEIPARVPSASVSVFGVSAESMQCSYDSKGNSVPTILLLMQDRLYSQRGLKAEGIFRINPENSQEEHVRDQLNRGIVPDDIDVHCLAGLIKAWFRELPSGVLDGLSPEQVLQCNTEEESVDLVKQLKPTESALLSWAIDLMADVVEEEEFNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLREREETTPGGYSPMSFHSSGRHSEDEYDSQREMDTSGELRGAKSDYDAHYGQSSEGEAESLSEIEECFLKQLDENTKGFSQEPDGNLEKYVSTISYSAYSMEPSISVTDNKAGNSCLRTTLTSSVDTSSSSIGCTSTKDVEIVDKYADSISPVTLLASS* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1190 451 Gene3D Rho GTPase activation protein 102 298 IPR008936 GO:0007165
Vra8g1190 451 PANTHER RHO GTPASE ACTIVATION PROTEIN-RELATED 1 422 - -
Vra8g1190 451 CDD RhoGAP 132 288 - -
Vra8g1190 451 MobiDBLite consensus disorder prediction 295 351 - -
Vra8g1190 451 Pfam RhoGAP domain 132 266 IPR000198 GO:0007165
Vra8g1190 451 Pfam P21-Rho-binding domain 69 100 IPR000095 -
Vra8g1190 451 ProSiteProfiles Rho GTPase-activating proteins domain profile. 115 296 IPR000198 GO:0007165
Vra8g1190 451 MobiDBLite consensus disorder prediction 311 337 - -
Vra8g1190 451 SMART PBD_5 70 104 IPR000095 -
Vra8g1190 451 Gene3D CRIB domain 65 101 IPR036936 -
Vra8g1190 451 ProSiteProfiles CRIB domain profile. 70 83 IPR000095 -
Vra8g1190 451 SMART RhoGAP_3 129 292 IPR000198 GO:0007165
Vra8g1190 451 PANTHER MKIAA1688 PROTEIN 1 422 IPR044785 GO:0005096
Vra8g1190 451 SUPERFAMILY GTPase activation domain, GAP 111 289 IPR008936 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1190 Vra-Chr8 27120055 27123157 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1190 - - gmx:100801481 732.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g1190 8 27120055 27123157 Vra8g1190 8 27120055 27123157 ECH
Vra3g0657 3 7089948 7093271 Vra8g1190 8 27120055 27123157 PCT