Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1183 ATGGCCACCTGCAAAAATCTCTGTGCTCTTCTCCTTTTGCTTTTCTTCTCTTTTCTACATGTGAAGGCTATTTTAGACCCTGCTGATTTCCTCGCTCTGCAATCCATTCGTAAAGCCCTCCAAGACATGCCCGGTTCCCATTTCTTCTCCTCCTGGGATTTCACCGCAGACCCATGCAACTTCGCCGGGGTTTACTGCGACTCCGACAGGGTCATCTCCCTCAACCTCGGCGATCCCAGGGCCGGCTCTCCCGGACTCACCGGCCGCCTCGACCCCGCCCTCGGCAAGCTCTCCGCGCTCGCCGAGTTCACCGTTGTCCCCGGCAGAATCTACGGTCCTCTCCCAGAATCCCTCTCTGATTTGAAGAACCTCAGGTTTCTCGGCGTCAACCGCAACTTCATCTCCGGCGAAATTCCTACCCAGCTCGGCGAGTTACGCAGCCTCAGAACCATCGATCTCAGCTACAACCAACTCACTGGACGCATTCCTCCAACCGTGGGATCACTACCGGAGCTGACTAACCTGATCCTCTGCCATAACCGCCTCTCCGGTTCGCTCCCCCGGTTCGAGTCACACACTTTAACGCGGCTCGACCTAAAGCATAACTCTCTCTCCGGTTCGCTCCCTCCCAACTCGCTCCCTCCCTCTCTGCAGTACCTCTCCCTGGCCTGGAACCAGCTCACCGGCCCAATGGACCGCCTCCTGGGCCGCCTCGACCAGCTTAACTATTTGGACCTTAGTCTCAACCAGTTCACGGGCCCAATCCCGGACCGGATCTTTTCCTTCCCGCTCACGAATCTGCAGCTGGAGAGGAACCAGTTCTCGGGTCCGGTCCAGCCCGTTGAGCAGGTGTCCATCCCGACCGTTGATCTTAGTTATAACCGGCTCTCCGGTCAGATATCGCCAATGCTGGCGAGCGTGCAGTACCTGTACCTGAATAACAACCGGTTTTCTGGTCGGGTACCGGCTAGCTTCGTGGAGCGGTTGCTGGACGCGAGCATTCAGATACTTTACTTGCAGCATAACTATCTGACGGGGATTGAGATAAGCCCAACGGCGGTGATTCCAGAGAGAAGCTCCCTGTGTCTGCAGTATAATTGCATGGTCCCGCCCGTTGAGACGCCCTGTCCCTTGAGGGCTGGCAAGCAGAAAACCAGGCCTACTGCGCAATGCAACCAGTTGAAAACCTGA 1191 0.5676 MATCKNLCALLLLLFFSFLHVKAILDPADFLALQSIRKALQDMPGSHFFSSWDFTADPCNFAGVYCDSDRVISLNLGDPRAGSPGLTGRLDPALGKLSALAEFTVVPGRIYGPLPESLSDLKNLRFLGVNRNFISGEIPTQLGELRSLRTIDLSYNQLTGRIPPTVGSLPELTNLILCHNRLSGSLPRFESHTLTRLDLKHNSLSGSLPPNSLPPSLQYLSLAWNQLTGPMDRLLGRLDQLNYLDLSLNQFTGPIPDRIFSFPLTNLQLERNQFSGPVQPVEQVSIPTVDLSYNRLSGQISPMLASVQYLYLNNNRFSGRVPASFVERLLDASIQILYLQHNYLTGIEISPTAVIPERSSLCLQYNCMVPPVETPCPLRAGKQKTRPTAQCNQLKT* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1183 396 Pfam Leucine Rich Repeat 147 169 IPR001611 GO:0005515
Vra8g1183 396 Gene3D Ribonuclease Inhibitor 192 372 IPR032675 -
Vra8g1183 396 SUPERFAMILY L domain-like 38 369 - -
Vra8g1183 396 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Vra8g1183 396 PANTHER LRR RECEPTOR-LIKE KINASE 7 393 - -
Vra8g1183 396 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 7 393 - -
Vra8g1183 396 Pfam Leucine Rich repeat 191 206 IPR001611 GO:0005515
Vra8g1183 396 Gene3D Ribonuclease Inhibitor 28 191 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1183 Vra-Chr8 26984022 26985687 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1183 24 346 Receptor kinase-like Gene Family AT3G51740 32.778 3.09e-38 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1183 - - gmx:100800224 694.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g1183 8 26984022 26985687 Vra8g1183 8 26984022 26985687 ECH
Vra3g0064 3 723954 726068 Vra8g1183 8 26984022 26985687 PCT