Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0064 ATGGATGTCGCTTCCTACTTTCTTCTTTTCGTCTGCTTTCTTCAATCGGTCATAGCAATATTAGACCCCAACGATTTCCTCGCTCTGCAATCCATACGGAAATCGCTTCACGATGTTCCCGGTTCTAATTTCTTCGCCTCCTGGGACTTCACTGCCGACCCCTGCAACTTCCCCGGCGTTTACTGCGTCGACGATAAAGTCGTCGCGCTCAACCTCGGCGACCCCAGGGCCGGTTCCCCCGGTCTCACTGGAAAACTCGACCATTCCATTTCCAAGCTGTCTGCTCTCGCCGACCTCACCGTCGTCCCCGGAAGAATATACGGCCCTCTCCCTCAGTCGATCTCCCAGTTAAAAAACCTCCGGTTCCTCGGCGTCAGCCGGAATTTCATCTCCGGCGAGATTCCGCCGGGTTTAAGTCAGCTTCGCAATATTAGAACCATCGATCTCAGTTACAACCAGCTCACCGGAACAATTCCTCCGTCCATCGGAACCTTACCGCTGCTGACCAACCTCATCCTCTGCCACAACCGCCTCTCCGGTTCGGTTCCCTCGTTCGCCTCGGCTTTTTCCCTAACCCGGCTCGAACTGAAGCACAACGCTCTCTCCGGTTCCCTCGCGCCGTACTCTCTCCCTCCCTCCCTACACTACCTGTCTCTATCGTGGAACAAACTCACTGGACCAGTGGACCGCCTCTTAACGCGCCTCAATCGGCTTAACTACTTGGACCTTGGCTTGAACCAGTTCACAGGCCGAATTCCGACTGAAATATTCTCATTCCCCCTCACTAATCTACAACTGGAAAGAAACCAATTCACCGGCCCGGTCCAACCGGTCAATGAGGTGACCATCCAGACCGTTGATCTCAGCTACAACAGGTTATCCGGTCAGGTGTCGCCAATGCTGGCGAGCGTGCAGAACCTGTACCTAAACAACAACTGGTTCACAGGGCAGGTTCCTGGCAGCTTCGTTGAACGGTTATTGGCGGCGGGCATTCAGATACTGTATTTGCAGCACAATTTTCTTACCGGCATTGCAATAAGCCCGACGGCGGAGATTCCGGTGAGCAGCACCCTGTGTTTGCAGTACAACTGCATGGTACCACCGGTACAGACGGCGTGCCCCTTCAACGCCGGGAAGCGGAAAATCAGACCAGCTCAGCAGTGCAACCGCCGCTGA 1176 0.5468 MDVASYFLLFVCFLQSVIAILDPNDFLALQSIRKSLHDVPGSNFFASWDFTADPCNFPGVYCVDDKVVALNLGDPRAGSPGLTGKLDHSISKLSALADLTVVPGRIYGPLPQSISQLKNLRFLGVSRNFISGEIPPGLSQLRNIRTIDLSYNQLTGTIPPSIGTLPLLTNLILCHNRLSGSVPSFASAFSLTRLELKHNALSGSLAPYSLPPSLHYLSLSWNKLTGPVDRLLTRLNRLNYLDLGLNQFTGRIPTEIFSFPLTNLQLERNQFTGPVQPVNEVTIQTVDLSYNRLSGQVSPMLASVQNLYLNNNWFTGQVPGSFVERLLAAGIQILYLQHNFLTGIAISPTAEIPVSSTLCLQYNCMVPPVQTACPFNAGKRKIRPAQQCNRR* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0064 391 PANTHER LRR RECEPTOR-LIKE KINASE 3 390 - -
Vra3g0064 391 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 3 390 - -
Vra3g0064 391 Gene3D Ribonuclease Inhibitor 22 210 IPR032675 -
Vra3g0064 391 Gene3D Ribonuclease Inhibitor 211 375 IPR032675 -
Vra3g0064 391 SUPERFAMILY L domain-like 23 365 - -
Vra3g0064 391 Pfam Leucine rich repeat N-terminal domain 23 62 IPR013210 -
Vra3g0064 391 Pfam Leucine Rich Repeat 143 163 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0064 Vra-Chr3 723954 726068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0064 25 369 Receptor kinase-like Gene Family AT3G51740 32.222 1.59e-32 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0064 - - gmx:100817314 687.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0064 3 723954 726068 Vra3g0064 3 723954 726068 ECH
Vra3g0064 3 723954 726068 Vra8g1183 8 26984022 26985687 PCT